Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 LINC01099-202ENST00000512527 578 ntTSL 2 BASIC19.53■□□□□ 0.72
HOXD11P31277 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC19.53■□□□□ 0.72
HOXD11P31277 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.53■□□□□ 0.72
HOXD11P31277 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC19.53■□□□□ 0.72
HOXD11P31277 AP000793.1-201ENST00000527364 740 ntTSL 3 BASIC19.53■□□□□ 0.72
HOXD11P31277 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.53■□□□□ 0.72
HOXD11P31277 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC19.53■□□□□ 0.72
HOXD11P31277 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.53■□□□□ 0.72
HOXD11P31277 AC106730.1-201ENST00000566722 1090 ntBASIC19.53■□□□□ 0.72
HOXD11P31277 BNIP3P31-201ENST00000604515 566 ntBASIC19.53■□□□□ 0.72
HOXD11P31277 AC010872.1-201ENST00000624225 675 ntBASIC19.53■□□□□ 0.72
HOXD11P31277 AC112497.1-201ENST00000624824 639 ntBASIC19.53■□□□□ 0.72
HOXD11P31277 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC19.53■□□□□ 0.72
HOXD11P31277 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.53■□□□□ 0.72
HOXD11P31277 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXD11P31277 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.53■□□□□ 0.72
HOXD11P31277 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXD11P31277 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HOXD11P31277 RPL31P11-201ENST00000426558 1558 ntBASIC19.53■□□□□ 0.72
HOXD11P31277 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.52■□□□□ 0.72
HOXD11P31277 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HOXD11P31277 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HOXD11P31277 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXD11P31277 AC099786.3-201ENST00000565735 1410 ntBASIC19.52■□□□□ 0.72
HOXD11P31277 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXD11P31277 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.52■□□□□ 0.72
HOXD11P31277 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
HOXD11P31277 EP400NL-214ENST00000641289 2402 ntBASIC19.52■□□□□ 0.72
HOXD11P31277 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HOXD11P31277 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.52■□□□□ 0.72
HOXD11P31277 OR5T3-201ENST00000303059 1023 ntBASIC19.52■□□□□ 0.72
HOXD11P31277 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HOXD11P31277 ZNF684-202ENST00000372697 1028 ntTSL 3 BASIC19.52■□□□□ 0.72
HOXD11P31277 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.52■□□□□ 0.72
HOXD11P31277 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.52■□□□□ 0.72
HOXD11P31277 FAM8A3P-201ENST00000427218 844 ntBASIC19.52■□□□□ 0.72
HOXD11P31277 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.52■□□□□ 0.72
HOXD11P31277 P2RX6P-201ENST00000439119 468 ntTSL 3 BASIC19.52■□□□□ 0.72
HOXD11P31277 AL357060.2-201ENST00000440578 1025 ntTSL 3 BASIC19.52■□□□□ 0.72
HOXD11P31277 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC19.52■□□□□ 0.72
HOXD11P31277 SPDYE13P-201ENST00000445314 798 ntBASIC19.52■□□□□ 0.72
HOXD11P31277 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC19.52■□□□□ 0.72
HOXD11P31277 AC008549.1-201ENST00000512900 643 ntBASIC19.52■□□□□ 0.72
HOXD11P31277 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
HOXD11P31277 TPSP2-201ENST00000561760 610 ntBASIC19.52■□□□□ 0.72
HOXD11P31277 AP000692.2-201ENST00000608391 879 ntBASIC19.52■□□□□ 0.72
HOXD11P31277 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.52■□□□□ 0.72
HOXD11P31277 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC19.52■□□□□ 0.72
HOXD11P31277 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC19.52■□□□□ 0.72
HOXD11P31277 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXD11P31277 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HOXD11P31277 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXD11P31277 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.52■□□□□ 0.72
HOXD11P31277 AC016734.2-201ENST00000624325 1377 ntBASIC19.52■□□□□ 0.72
HOXD11P31277 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.52■□□□□ 0.72
HOXD11P31277 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.52■□□□□ 0.71
HOXD11P31277 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HOXD11P31277 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXD11P31277 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXD11P31277 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HOXD11P31277 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HOXD11P31277 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.51■□□□□ 0.71
HOXD11P31277 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXD11P31277 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.51■□□□□ 0.71
HOXD11P31277 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.51■□□□□ 0.71
HOXD11P31277 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
HOXD11P31277 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
HOXD11P31277 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXD11P31277 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.51■□□□□ 0.71
HOXD11P31277 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
HOXD11P31277 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.51■□□□□ 0.71
HOXD11P31277 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXD11P31277 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXD11P31277 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXD11P31277 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXD11P31277 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HOXD11P31277 NDUFB6-201ENST00000350021 666 ntTSL 2 BASIC19.51■□□□□ 0.71
HOXD11P31277 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.51■□□□□ 0.71
HOXD11P31277 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXD11P31277 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.51■□□□□ 0.71
HOXD11P31277 STARP1-201ENST00000397973 869 ntBASIC19.51■□□□□ 0.71
HOXD11P31277 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HOXD11P31277 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC19.51■□□□□ 0.71
HOXD11P31277 NLGN4Y-AS1-201ENST00000434164 532 ntTSL 5 BASIC19.51■□□□□ 0.71
HOXD11P31277 MTND2P8-201ENST00000450555 1025 ntBASIC19.51■□□□□ 0.71
HOXD11P31277 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
HOXD11P31277 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.51■□□□□ 0.71
HOXD11P31277 KRT18P31-201ENST00000506277 1292 ntBASIC19.51■□□□□ 0.71
HOXD11P31277 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC19.51■□□□□ 0.71
HOXD11P31277 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC19.51■□□□□ 0.71
HOXD11P31277 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.51■□□□□ 0.71
HOXD11P31277 VPS29-203ENST00000546588 1059 ntTSL 3 BASIC19.51■□□□□ 0.71
HOXD11P31277 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HOXD11P31277 AC012615.1-201ENST00000565797 1299 ntBASIC19.51■□□□□ 0.71
HOXD11P31277 AP001005.1-201ENST00000571755 1248 ntBASIC19.51■□□□□ 0.71
HOXD11P31277 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.51■□□□□ 0.71
HOXD11P31277 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.51■□□□□ 0.71
HOXD11P31277 AC239868.4-201ENST00000608318 671 ntBASIC19.51■□□□□ 0.71
HOXD11P31277 AL121672.3-201ENST00000608644 468 ntBASIC19.51■□□□□ 0.71
HOXD11P31277 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms