Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
GDF1P27539 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GDF1P27539 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDF1P27539 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GDF1P27539 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDF1P27539 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDF1P27539 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDF1P27539 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
GDF1P27539 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDF1P27539 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDF1P27539 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDF1P27539 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDF1P27539 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDF1P27539 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
GDF1P27539 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.59■□□□□ 0.25
GDF1P27539 IGHGP-201ENST00000390555 1178 ntBASIC16.59■□□□□ 0.25
GDF1P27539 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
GDF1P27539 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.59■□□□□ 0.25
GDF1P27539 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.59■□□□□ 0.25
GDF1P27539 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.59■□□□□ 0.25
GDF1P27539 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.59■□□□□ 0.25
GDF1P27539 AC092329.2-201ENST00000598402 547 ntBASIC16.59■□□□□ 0.25
GDF1P27539 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.59■□□□□ 0.25
GDF1P27539 AL390719.2-201ENST00000606993 987 ntBASIC16.59■□□□□ 0.25
GDF1P27539 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GDF1P27539 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDF1P27539 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
GDF1P27539 KRT18P1-202ENST00000452408 1331 ntBASIC16.59■□□□□ 0.25
GDF1P27539 AC005082.1-201ENST00000413042 2259 ntBASIC16.59■□□□□ 0.25
GDF1P27539 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDF1P27539 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.59■□□□□ 0.25
GDF1P27539 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDF1P27539 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GDF1P27539 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.59■□□□□ 0.25
GDF1P27539 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
GDF1P27539 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GDF1P27539 AL031598.1-201ENST00000561511 1773 ntBASIC16.59■□□□□ 0.25
GDF1P27539 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
GDF1P27539 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
GDF1P27539 SDHAP2-201ENST00000455183 2001 ntBASIC16.58■□□□□ 0.25
GDF1P27539 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
GDF1P27539 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
GDF1P27539 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
GDF1P27539 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
GDF1P27539 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GDF1P27539 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GDF1P27539 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.58■□□□□ 0.24
GDF1P27539 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.58■□□□□ 0.24
GDF1P27539 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GDF1P27539 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.58■□□□□ 0.24
GDF1P27539 AP002414.4-201ENST00000589764 1148 ntBASIC16.58■□□□□ 0.24
GDF1P27539 NPAP1P7-201ENST00000613027 823 ntBASIC16.58■□□□□ 0.24
GDF1P27539 KRT89P-201ENST00000620027 1478 ntBASIC16.58■□□□□ 0.24
GDF1P27539 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
GDF1P27539 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.58■□□□□ 0.24
GDF1P27539 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
GDF1P27539 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.58■□□□□ 0.24
GDF1P27539 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.58■□□□□ 0.24
GDF1P27539 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.58■□□□□ 0.24
GDF1P27539 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GDF1P27539 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
GDF1P27539 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GDF1P27539 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.57■□□□□ 0.24
GDF1P27539 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
GDF1P27539 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GDF1P27539 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.57■□□□□ 0.24
GDF1P27539 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.57■□□□□ 0.24
GDF1P27539 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GDF1P27539 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
GDF1P27539 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GDF1P27539 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GDF1P27539 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GDF1P27539 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GDF1P27539 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GDF1P27539 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.57■□□□□ 0.24
GDF1P27539 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GDF1P27539 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
GDF1P27539 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.57■□□□□ 0.24
GDF1P27539 IGHV3-41-201ENST00000613121 348 ntBASIC16.57■□□□□ 0.24
GDF1P27539 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.57■□□□□ 0.24
GDF1P27539 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
GDF1P27539 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GDF1P27539 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GDF1P27539 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GDF1P27539 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.57■□□□□ 0.24
GDF1P27539 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
GDF1P27539 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.57■□□□□ 0.24
GDF1P27539 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.57■□□□□ 0.24
GDF1P27539 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
GDF1P27539 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GDF1P27539 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GDF1P27539 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GDF1P27539 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
GDF1P27539 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms