Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN3P26045 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
PTPN3P26045 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN3P26045 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN3P26045 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN3P26045 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPN3P26045 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN3P26045 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN3P26045 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.68■□□□□ 0.58
PTPN3P26045 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN3P26045 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN3P26045 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
PTPN3P26045 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN3P26045 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PTPN3P26045 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN3P26045 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN3P26045 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN3P26045 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.68■□□□□ 0.58
PTPN3P26045 AP000523.1-201ENST00000398242 1049 ntBASIC18.68■□□□□ 0.58
PTPN3P26045 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.68■□□□□ 0.58
PTPN3P26045 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.68■□□□□ 0.58
PTPN3P26045 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN3P26045 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.68■□□□□ 0.58
PTPN3P26045 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PTPN3P26045 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.68■□□□□ 0.58
PTPN3P26045 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN3P26045 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PTPN3P26045 MIR3917-201ENST00000580971 93 ntBASIC18.68■□□□□ 0.58
PTPN3P26045 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.68■□□□□ 0.58
PTPN3P26045 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN3P26045 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN3P26045 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN3P26045 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN3P26045 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN3P26045 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN3P26045 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN3P26045 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.68■□□□□ 0.58
PTPN3P26045 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN3P26045 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN3P26045 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN3P26045 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN3P26045 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN3P26045 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN3P26045 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.67■□□□□ 0.58
PTPN3P26045 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN3P26045 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
PTPN3P26045 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN3P26045 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN3P26045 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN3P26045 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN3P26045 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.67■□□□□ 0.58
PTPN3P26045 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
PTPN3P26045 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN3P26045 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
PTPN3P26045 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.67■□□□□ 0.58
PTPN3P26045 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN3P26045 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN3P26045 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN3P26045 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN3P26045 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
PTPN3P26045 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PTPN3P26045 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN3P26045 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PTPN3P26045 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
PTPN3P26045 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.66■□□□□ 0.58
PTPN3P26045 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN3P26045 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN3P26045 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN3P26045 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN3P26045 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN3P26045 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN3P26045 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.66■□□□□ 0.58
PTPN3P26045 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.66■□□□□ 0.58
PTPN3P26045 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
PTPN3P26045 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN3P26045 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN3P26045 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN3P26045 AC113347.1-201ENST00000413321 391 ntBASIC18.66■□□□□ 0.58
PTPN3P26045 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.66■□□□□ 0.58
PTPN3P26045 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.66■□□□□ 0.58
PTPN3P26045 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PTPN3P26045 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.66■□□□□ 0.58
PTPN3P26045 GCSHP2-201ENST00000560971 527 ntBASIC18.66■□□□□ 0.58
PTPN3P26045 AL023973.1-201ENST00000624619 620 ntBASIC18.66■□□□□ 0.58
PTPN3P26045 AC092865.7-201ENST00000641832 219 ntBASIC18.66■□□□□ 0.58
PTPN3P26045 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN3P26045 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.66■□□□□ 0.58
PTPN3P26045 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PTPN3P26045 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.66■□□□□ 0.58
PTPN3P26045 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN3P26045 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.66■□□□□ 0.58
PTPN3P26045 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN3P26045 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.66■□□□□ 0.58
PTPN3P26045 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN3P26045 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN3P26045 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPN3P26045 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN3P26045 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN3P26045 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN3P26045 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms