Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.29■□□□□ 0.52
XRCC1P18887 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
XRCC1P18887 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.29■□□□□ 0.52
XRCC1P18887 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
XRCC1P18887 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.29■□□□□ 0.52
XRCC1P18887 ABALON-201ENST00000629058 1903 ntBASIC18.29■□□□□ 0.52
XRCC1P18887 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
XRCC1P18887 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
XRCC1P18887 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.28■□□□□ 0.52
XRCC1P18887 AL109659.2-201ENST00000606809 1674 ntBASIC18.28■□□□□ 0.52
XRCC1P18887 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
XRCC1P18887 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
XRCC1P18887 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
XRCC1P18887 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
XRCC1P18887 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
XRCC1P18887 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.28■□□□□ 0.52
XRCC1P18887 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.28■□□□□ 0.52
XRCC1P18887 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.28■□□□□ 0.52
XRCC1P18887 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.28■□□□□ 0.52
XRCC1P18887 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.28■□□□□ 0.52
XRCC1P18887 AC087388.1-201ENST00000571370 1112 ntBASIC18.28■□□□□ 0.52
XRCC1P18887 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
XRCC1P18887 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.28■□□□□ 0.52
XRCC1P18887 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.28■□□□□ 0.52
XRCC1P18887 MYC-208ENST00000641036 567 ntBASIC18.28■□□□□ 0.52
XRCC1P18887 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
XRCC1P18887 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
XRCC1P18887 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.28■□□□□ 0.52
XRCC1P18887 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
XRCC1P18887 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
XRCC1P18887 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
XRCC1P18887 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
XRCC1P18887 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
XRCC1P18887 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.28■□□□□ 0.52
XRCC1P18887 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
XRCC1P18887 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
XRCC1P18887 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.27■□□□□ 0.52
XRCC1P18887 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
XRCC1P18887 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
XRCC1P18887 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
XRCC1P18887 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
XRCC1P18887 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.27■□□□□ 0.52
XRCC1P18887 ANO7L1-203ENST00000602586 1720 ntBASIC18.27■□□□□ 0.52
XRCC1P18887 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
XRCC1P18887 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
XRCC1P18887 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
XRCC1P18887 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
XRCC1P18887 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
XRCC1P18887 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
XRCC1P18887 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
XRCC1P18887 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
XRCC1P18887 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.27■□□□□ 0.52
XRCC1P18887 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
XRCC1P18887 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.27■□□□□ 0.52
XRCC1P18887 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.27■□□□□ 0.52
XRCC1P18887 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
XRCC1P18887 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
XRCC1P18887 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.27■□□□□ 0.52
XRCC1P18887 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.27■□□□□ 0.52
XRCC1P18887 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
XRCC1P18887 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
XRCC1P18887 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
XRCC1P18887 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
XRCC1P18887 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
XRCC1P18887 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
XRCC1P18887 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
XRCC1P18887 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
XRCC1P18887 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
XRCC1P18887 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
XRCC1P18887 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.27■□□□□ 0.51
XRCC1P18887 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.27■□□□□ 0.51
XRCC1P18887 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.27■□□□□ 0.51
XRCC1P18887 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
XRCC1P18887 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
XRCC1P18887 KRT8P32-201ENST00000512863 1461 ntBASIC18.26■□□□□ 0.51
XRCC1P18887 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
XRCC1P18887 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
XRCC1P18887 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.26■□□□□ 0.51
XRCC1P18887 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
XRCC1P18887 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.26■□□□□ 0.51
XRCC1P18887 AC036111.1-201ENST00000533973 1582 ntBASIC18.26■□□□□ 0.51
XRCC1P18887 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.26■□□□□ 0.51
XRCC1P18887 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
XRCC1P18887 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
XRCC1P18887 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
XRCC1P18887 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
XRCC1P18887 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
XRCC1P18887 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.26■□□□□ 0.51
XRCC1P18887 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
XRCC1P18887 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
XRCC1P18887 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.26■□□□□ 0.51
XRCC1P18887 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
XRCC1P18887 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
XRCC1P18887 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.26■□□□□ 0.51
XRCC1P18887 GCSHP2-201ENST00000560971 527 ntBASIC18.26■□□□□ 0.51
XRCC1P18887 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
XRCC1P18887 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.26■□□□□ 0.51
XRCC1P18887 RCC2P3-201ENST00000418112 1537 ntBASIC18.26■□□□□ 0.51
XRCC1P18887 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
XRCC1P18887 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms