Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BRAFP15056 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
BRAFP15056 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.86■□□□□ 0.61
BRAFP15056 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
BRAFP15056 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
BRAFP15056 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRAFP15056 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRAFP15056 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRAFP15056 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
BRAFP15056 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRAFP15056 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRAFP15056 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRAFP15056 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRAFP15056 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRAFP15056 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRAFP15056 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.85■□□□□ 0.61
BRAFP15056 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.85■□□□□ 0.61
BRAFP15056 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRAFP15056 ECEL1P3-201ENST00000427961 737 ntBASIC18.85■□□□□ 0.61
BRAFP15056 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.85■□□□□ 0.61
BRAFP15056 AC091390.4-202ENST00000476426 537 ntBASIC18.85■□□□□ 0.61
BRAFP15056 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
BRAFP15056 AC011298.2-201ENST00000617989 482 ntBASIC18.85■□□□□ 0.61
BRAFP15056 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.85■□□□□ 0.61
BRAFP15056 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.85■□□□□ 0.61
BRAFP15056 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.85■□□□□ 0.61
BRAFP15056 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRAFP15056 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRAFP15056 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRAFP15056 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRAFP15056 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.85■□□□□ 0.61
BRAFP15056 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRAFP15056 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
BRAFP15056 KRT8P41-201ENST00000533985 1514 ntBASIC18.84■□□□□ 0.61
BRAFP15056 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.84■□□□□ 0.61
BRAFP15056 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
BRAFP15056 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRAFP15056 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRAFP15056 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRAFP15056 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRAFP15056 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRAFP15056 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRAFP15056 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRAFP15056 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.84■□□□□ 0.61
BRAFP15056 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.84■□□□□ 0.61
BRAFP15056 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
BRAFP15056 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
BRAFP15056 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRAFP15056 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRAFP15056 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRAFP15056 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRAFP15056 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.84■□□□□ 0.61
BRAFP15056 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRAFP15056 TSPY23P-201ENST00000440136 739 ntBASIC18.84■□□□□ 0.61
BRAFP15056 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.84■□□□□ 0.61
BRAFP15056 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
BRAFP15056 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.84■□□□□ 0.61
BRAFP15056 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.84■□□□□ 0.61
BRAFP15056 AP000692.2-201ENST00000608391 879 ntBASIC18.84■□□□□ 0.61
BRAFP15056 DGCR10-201ENST00000609839 495 ntBASIC18.84■□□□□ 0.61
BRAFP15056 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.84■□□□□ 0.61
BRAFP15056 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
BRAFP15056 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRAFP15056 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.84■□□□□ 0.61
BRAFP15056 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRAFP15056 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
BRAFP15056 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.84■□□□□ 0.61
BRAFP15056 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.84■□□□□ 0.61
BRAFP15056 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BRAFP15056 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BRAFP15056 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.83■□□□□ 0.61
BRAFP15056 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BRAFP15056 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
BRAFP15056 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BRAFP15056 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
BRAFP15056 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
BRAFP15056 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.83■□□□□ 0.6
BRAFP15056 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.83■□□□□ 0.6
BRAFP15056 AC012306.2-201ENST00000609350 630 ntBASIC18.83■□□□□ 0.6
BRAFP15056 AC133561.5-201ENST00000635547 218 ntBASIC18.83■□□□□ 0.6
BRAFP15056 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.83■□□□□ 0.6
BRAFP15056 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRAFP15056 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRAFP15056 MTMR9LP-203ENST00000426597 1545 ntBASIC18.83■□□□□ 0.6
BRAFP15056 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.83■□□□□ 0.6
BRAFP15056 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BRAFP15056 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRAFP15056 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.83■□□□□ 0.6
BRAFP15056 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BRAFP15056 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAFP15056 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.82■□□□□ 0.6
BRAFP15056 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.82■□□□□ 0.6
BRAFP15056 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAFP15056 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
BRAFP15056 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAFP15056 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.82■□□□□ 0.6
BRAFP15056 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BRAFP15056 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAFP15056 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAFP15056 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms