Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
POLR3DP05423 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
POLR3DP05423 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.87■■□□□ 1.09
POLR3DP05423 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.87■■□□□ 1.09
POLR3DP05423 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.87■■□□□ 1.09
POLR3DP05423 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
POLR3DP05423 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.87■■□□□ 1.09
POLR3DP05423 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.87■■□□□ 1.09
POLR3DP05423 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
POLR3DP05423 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
POLR3DP05423 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
POLR3DP05423 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.87■■□□□ 1.09
POLR3DP05423 CHCHD2P8-201ENST00000429873 447 ntBASIC21.87■■□□□ 1.09
POLR3DP05423 AP002383.4-201ENST00000442518 975 ntBASIC21.87■■□□□ 1.09
POLR3DP05423 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
POLR3DP05423 CLEC4GP1-201ENST00000596555 870 ntBASIC21.87■■□□□ 1.09
POLR3DP05423 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
POLR3DP05423 AC099343.3-201ENST00000605834 2503 ntBASIC21.87■■□□□ 1.09
POLR3DP05423 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.87■■□□□ 1.09
POLR3DP05423 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
POLR3DP05423 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
POLR3DP05423 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
POLR3DP05423 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
POLR3DP05423 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
POLR3DP05423 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
POLR3DP05423 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
POLR3DP05423 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
POLR3DP05423 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.87■■□□□ 1.09
POLR3DP05423 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
POLR3DP05423 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
POLR3DP05423 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
POLR3DP05423 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
POLR3DP05423 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
POLR3DP05423 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
POLR3DP05423 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
POLR3DP05423 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
POLR3DP05423 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
POLR3DP05423 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
POLR3DP05423 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
POLR3DP05423 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.86■■□□□ 1.09
POLR3DP05423 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.86■■□□□ 1.09
POLR3DP05423 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.86■■□□□ 1.09
POLR3DP05423 AP002414.4-201ENST00000589764 1148 ntBASIC21.86■■□□□ 1.09
POLR3DP05423 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
POLR3DP05423 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
POLR3DP05423 AL031598.1-201ENST00000561511 1773 ntBASIC21.86■■□□□ 1.09
POLR3DP05423 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
POLR3DP05423 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
POLR3DP05423 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
POLR3DP05423 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
POLR3DP05423 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.85■■□□□ 1.09
POLR3DP05423 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
POLR3DP05423 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
POLR3DP05423 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
POLR3DP05423 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
POLR3DP05423 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
POLR3DP05423 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
POLR3DP05423 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
POLR3DP05423 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
POLR3DP05423 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.85■■□□□ 1.09
POLR3DP05423 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.85■■□□□ 1.09
POLR3DP05423 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.85■■□□□ 1.09
POLR3DP05423 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
POLR3DP05423 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
POLR3DP05423 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.85■■□□□ 1.09
POLR3DP05423 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
POLR3DP05423 MIR3180-1-201ENST00000580374 94 ntBASIC21.85■■□□□ 1.09
POLR3DP05423 MIR3180-3-201ENST00000584616 94 ntBASIC21.85■■□□□ 1.09
POLR3DP05423 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.85■■□□□ 1.09
POLR3DP05423 AC112777.1-201ENST00000540175 1423 ntBASIC21.85■■□□□ 1.09
POLR3DP05423 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
POLR3DP05423 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
POLR3DP05423 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
POLR3DP05423 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
POLR3DP05423 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
POLR3DP05423 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.85■■□□□ 1.09
POLR3DP05423 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
POLR3DP05423 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
POLR3DP05423 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
POLR3DP05423 KRT18P1-202ENST00000452408 1331 ntBASIC21.84■■□□□ 1.09
POLR3DP05423 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
POLR3DP05423 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
POLR3DP05423 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.84■■□□□ 1.09
POLR3DP05423 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.84■■□□□ 1.09
POLR3DP05423 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
POLR3DP05423 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
POLR3DP05423 MYLKP1-201ENST00000509077 1580 ntBASIC21.84■■□□□ 1.09
POLR3DP05423 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
POLR3DP05423 MIR149-201ENST00000384879 89 ntBASIC21.84■■□□□ 1.09
POLR3DP05423 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
POLR3DP05423 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.84■■□□□ 1.09
POLR3DP05423 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
POLR3DP05423 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.84■■□□□ 1.09
POLR3DP05423 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.84■■□□□ 1.09
POLR3DP05423 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.84■■□□□ 1.09
POLR3DP05423 KRT126P-201ENST00000549467 1181 ntBASIC21.84■■□□□ 1.09
POLR3DP05423 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.84■■□□□ 1.09
POLR3DP05423 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
POLR3DP05423 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
POLR3DP05423 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms