Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL1A1P02452 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL1A1P02452 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL1A1P02452 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
COL1A1P02452 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL1A1P02452 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL1A1P02452 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A1P02452 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A1P02452 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A1P02452 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A1P02452 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.96■■□□□ 1.11
COL1A1P02452 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.96■■□□□ 1.11
COL1A1P02452 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
COL1A1P02452 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
COL1A1P02452 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A1P02452 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.96■■□□□ 1.11
COL1A1P02452 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.96■■□□□ 1.11
COL1A1P02452 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC21.96■■□□□ 1.11
COL1A1P02452 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC21.96■■□□□ 1.11
COL1A1P02452 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.96■■□□□ 1.11
COL1A1P02452 AL138831.2-201ENST00000606564 490 ntBASIC21.96■■□□□ 1.11
COL1A1P02452 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A1P02452 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A1P02452 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A1P02452 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A1P02452 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.96■■□□□ 1.11
COL1A1P02452 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A1P02452 IL9RP2-201ENST00000423948 1312 ntBASIC21.96■■□□□ 1.11
COL1A1P02452 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A1P02452 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A1P02452 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A1P02452 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A1P02452 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A1P02452 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A1P02452 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
COL1A1P02452 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A1P02452 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A1P02452 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.96■■□□□ 1.11
COL1A1P02452 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.96■■□□□ 1.11
COL1A1P02452 AC009154.2-201ENST00000621177 724 ntBASIC21.96■■□□□ 1.11
COL1A1P02452 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.96■■□□□ 1.11
COL1A1P02452 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.96■■□□□ 1.11
COL1A1P02452 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
COL1A1P02452 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
COL1A1P02452 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
COL1A1P02452 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
COL1A1P02452 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.95■■□□□ 1.1
COL1A1P02452 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL1A1P02452 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.95■■□□□ 1.1
COL1A1P02452 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL1A1P02452 ESPNP-201ENST00000270691 2015 ntBASIC21.95■■□□□ 1.1
COL1A1P02452 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL1A1P02452 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.95■■□□□ 1.1
COL1A1P02452 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL1A1P02452 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL1A1P02452 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
COL1A1P02452 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL1A1P02452 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.95■■□□□ 1.1
COL1A1P02452 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL1A1P02452 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.95■■□□□ 1.1
COL1A1P02452 KRT18P67-201ENST00000432816 1264 ntBASIC21.95■■□□□ 1.1
COL1A1P02452 MINOS1P3-201ENST00000457048 203 ntBASIC21.95■■□□□ 1.1
COL1A1P02452 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.95■■□□□ 1.1
COL1A1P02452 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
COL1A1P02452 AC008687.5-201ENST00000593746 558 ntBASIC21.95■■□□□ 1.1
COL1A1P02452 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
COL1A1P02452 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL1A1P02452 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL1A1P02452 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.94■■□□□ 1.1
COL1A1P02452 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL1A1P02452 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL1A1P02452 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL1A1P02452 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL1A1P02452 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.94■■□□□ 1.1
COL1A1P02452 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL1A1P02452 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.94■■□□□ 1.1
COL1A1P02452 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL1A1P02452 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL1A1P02452 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.94■■□□□ 1.1
COL1A1P02452 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.94■■□□□ 1.1
COL1A1P02452 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.94■■□□□ 1.1
COL1A1P02452 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.94■■□□□ 1.1
COL1A1P02452 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
COL1A1P02452 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL1A1P02452 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL1A1P02452 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL1A1P02452 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL1A1P02452 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL1A1P02452 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.94■■□□□ 1.1
COL1A1P02452 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL1A1P02452 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.93■■□□□ 1.1
COL1A1P02452 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL1A1P02452 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL1A1P02452 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL1A1P02452 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.93■■□□□ 1.1
COL1A1P02452 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL1A1P02452 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL1A1P02452 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
COL1A1P02452 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL1A1P02452 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms