Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
TOP3BO95985 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TOP3BO95985 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP3BO95985 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP3BO95985 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.78■□□□□ 0.6
TOP3BO95985 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TOP3BO95985 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP3BO95985 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP3BO95985 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP3BO95985 AC112907.2-201ENST00000448639 330 ntBASIC18.78■□□□□ 0.6
TOP3BO95985 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.78■□□□□ 0.6
TOP3BO95985 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.78■□□□□ 0.6
TOP3BO95985 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.78■□□□□ 0.6
TOP3BO95985 AL160286.2-201ENST00000567150 934 ntBASIC18.78■□□□□ 0.6
TOP3BO95985 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.78■□□□□ 0.6
TOP3BO95985 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.78■□□□□ 0.6
TOP3BO95985 AL023803.3-201ENST00000615559 522 ntBASIC18.78■□□□□ 0.6
TOP3BO95985 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP3BO95985 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TOP3BO95985 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TOP3BO95985 KRT8P41-201ENST00000533985 1514 ntBASIC18.78■□□□□ 0.6
TOP3BO95985 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TOP3BO95985 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP3BO95985 AC096733.2-201ENST00000609937 1394 ntBASIC18.78■□□□□ 0.6
TOP3BO95985 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP3BO95985 FZD10-202ENST00000539839 3282 ntBASIC18.78■□□□□ 0.6
TOP3BO95985 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP3BO95985 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP3BO95985 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TOP3BO95985 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TOP3BO95985 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.77■□□□□ 0.6
TOP3BO95985 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.77■□□□□ 0.6
TOP3BO95985 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TOP3BO95985 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
TOP3BO95985 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
TOP3BO95985 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
TOP3BO95985 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.77■□□□□ 0.6
TOP3BO95985 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 AC004951.3-201ENST00000418645 1148 ntBASIC18.77■□□□□ 0.6
TOP3BO95985 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TOP3BO95985 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.77■□□□□ 0.6
TOP3BO95985 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.77■□□□□ 0.6
TOP3BO95985 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.77■□□□□ 0.6
TOP3BO95985 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 AC008622.2-201ENST00000617006 1229 ntBASIC18.77■□□□□ 0.6
TOP3BO95985 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
TOP3BO95985 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.77■□□□□ 0.6
TOP3BO95985 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TOP3BO95985 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.77■□□□□ 0.59
TOP3BO95985 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
TOP3BO95985 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.77■□□□□ 0.59
TOP3BO95985 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
TOP3BO95985 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TOP3BO95985 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
TOP3BO95985 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TOP3BO95985 NOC2LP2-201ENST00000407594 1944 ntBASIC18.76■□□□□ 0.59
TOP3BO95985 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TOP3BO95985 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TOP3BO95985 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TOP3BO95985 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TOP3BO95985 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TOP3BO95985 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TOP3BO95985 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TOP3BO95985 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TOP3BO95985 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TOP3BO95985 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.76■□□□□ 0.59
TOP3BO95985 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TOP3BO95985 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TOP3BO95985 ZNF444P1-201ENST00000559497 298 ntBASIC18.76■□□□□ 0.59
TOP3BO95985 PRELID1P1-202ENST00000567272 903 ntBASIC18.76■□□□□ 0.59
TOP3BO95985 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TOP3BO95985 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
TOP3BO95985 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TOP3BO95985 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.76■□□□□ 0.59
TOP3BO95985 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TOP3BO95985 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.76■□□□□ 0.59
TOP3BO95985 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TOP3BO95985 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TOP3BO95985 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms