Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.36■□□□□ 0.21
CDRT1O95170 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT1O95170 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT1O95170 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.36■□□□□ 0.21
CDRT1O95170 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT1O95170 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT1O95170 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT1O95170 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.36■□□□□ 0.21
CDRT1O95170 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT1O95170 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT1O95170 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT1O95170 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT1O95170 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT1O95170 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
CDRT1O95170 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.36■□□□□ 0.21
CDRT1O95170 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.36■□□□□ 0.21
CDRT1O95170 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.36■□□□□ 0.21
CDRT1O95170 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
CDRT1O95170 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.36■□□□□ 0.21
CDRT1O95170 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.36■□□□□ 0.21
CDRT1O95170 AL121829.2-201ENST00000620908 328 ntBASIC16.36■□□□□ 0.21
CDRT1O95170 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.36■□□□□ 0.21
CDRT1O95170 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT1O95170 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CDRT1O95170 AC011676.5-201ENST00000624864 2660 ntBASIC16.36■□□□□ 0.21
CDRT1O95170 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT1O95170 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT1O95170 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT1O95170 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT1O95170 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT1O95170 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CDRT1O95170 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT1O95170 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT1O95170 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.35■□□□□ 0.21
CDRT1O95170 OR6D1P-203ENST00000641209 4860 ntBASIC16.35■□□□□ 0.21
CDRT1O95170 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT1O95170 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT1O95170 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT1O95170 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CDRT1O95170 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT1O95170 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.35■□□□□ 0.21
CDRT1O95170 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT1O95170 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT1O95170 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.35■□□□□ 0.21
CDRT1O95170 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.35■□□□□ 0.21
CDRT1O95170 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.35■□□□□ 0.21
CDRT1O95170 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CDRT1O95170 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.35■□□□□ 0.21
CDRT1O95170 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT1O95170 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT1O95170 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT1O95170 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT1O95170 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT1O95170 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CDRT1O95170 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT1O95170 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CDRT1O95170 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT1O95170 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.35■□□□□ 0.21
CDRT1O95170 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT1O95170 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT1O95170 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
CDRT1O95170 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDRT1O95170 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDRT1O95170 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDRT1O95170 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CDRT1O95170 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDRT1O95170 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.34■□□□□ 0.21
CDRT1O95170 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDRT1O95170 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CDRT1O95170 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CDRT1O95170 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
CDRT1O95170 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CDRT1O95170 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDRT1O95170 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDRT1O95170 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDRT1O95170 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CDRT1O95170 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
CDRT1O95170 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDRT1O95170 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.34■□□□□ 0.21
CDRT1O95170 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.34■□□□□ 0.21
CDRT1O95170 AC008687.6-201ENST00000596318 630 ntBASIC16.34■□□□□ 0.21
CDRT1O95170 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.34■□□□□ 0.21
CDRT1O95170 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CDRT1O95170 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CDRT1O95170 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDRT1O95170 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDRT1O95170 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.34■□□□□ 0.21
CDRT1O95170 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDRT1O95170 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDRT1O95170 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CDRT1O95170 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDRT1O95170 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDRT1O95170 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDRT1O95170 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDRT1O95170 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDRT1O95170 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDRT1O95170 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CDRT1O95170 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.34■□□□□ 0.21
CDRT1O95170 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDRT1O95170 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms