Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.37■□□□□ 0.53
GPC4O75487 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.37■□□□□ 0.53
GPC4O75487 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GPC4O75487 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GPC4O75487 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
GPC4O75487 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
GPC4O75487 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.37■□□□□ 0.53
GPC4O75487 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GPC4O75487 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.37■□□□□ 0.53
GPC4O75487 FAM87A-204ENST00000613235 858 ntBASIC18.37■□□□□ 0.53
GPC4O75487 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.37■□□□□ 0.53
GPC4O75487 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC4O75487 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC4O75487 LINC01568-207ENST00000641790 1380 ntBASIC18.37■□□□□ 0.53
GPC4O75487 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GPC4O75487 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GPC4O75487 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC4O75487 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GPC4O75487 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
GPC4O75487 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GPC4O75487 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC4O75487 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
GPC4O75487 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.37■□□□□ 0.53
GPC4O75487 AL357033.4-201ENST00000617703 1807 ntBASIC18.37■□□□□ 0.53
GPC4O75487 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GPC4O75487 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC4O75487 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC4O75487 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC4O75487 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC4O75487 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC4O75487 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC4O75487 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
GPC4O75487 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
GPC4O75487 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC4O75487 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC4O75487 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC4O75487 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC4O75487 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC4O75487 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC4O75487 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GPC4O75487 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.36■□□□□ 0.53
GPC4O75487 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.36■□□□□ 0.53
GPC4O75487 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
GPC4O75487 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC4O75487 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.36■□□□□ 0.53
GPC4O75487 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC4O75487 ECEL1P2-202ENST00000465689 757 ntBASIC18.36■□□□□ 0.53
GPC4O75487 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GPC4O75487 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.36■□□□□ 0.53
GPC4O75487 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC4O75487 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
GPC4O75487 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
GPC4O75487 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
GPC4O75487 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
GPC4O75487 AC097493.4-201ENST00000641197 219 ntBASIC18.36■□□□□ 0.53
GPC4O75487 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC4O75487 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC4O75487 PCDHB18P-201ENST00000524813 2368 ntBASIC18.35■□□□□ 0.53
GPC4O75487 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC4O75487 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.35■□□□□ 0.53
GPC4O75487 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC4O75487 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC4O75487 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.35■□□□□ 0.53
GPC4O75487 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.35■□□□□ 0.53
GPC4O75487 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC4O75487 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
GPC4O75487 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
GPC4O75487 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC4O75487 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GPC4O75487 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
GPC4O75487 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC4O75487 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC4O75487 KRT18P22-201ENST00000402024 1347 ntBASIC18.35■□□□□ 0.53
GPC4O75487 MIR564-202ENST00000385049 94 ntBASIC18.35■□□□□ 0.53
GPC4O75487 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
GPC4O75487 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.35■□□□□ 0.53
GPC4O75487 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.35■□□□□ 0.53
GPC4O75487 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
GPC4O75487 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.35■□□□□ 0.53
GPC4O75487 WWOX-216ENST00000569818 525 ntBASIC18.35■□□□□ 0.53
GPC4O75487 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.35■□□□□ 0.53
GPC4O75487 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GPC4O75487 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.35■□□□□ 0.53
GPC4O75487 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC4O75487 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.35■□□□□ 0.53
GPC4O75487 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.35■□□□□ 0.53
GPC4O75487 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GPC4O75487 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GPC4O75487 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC4O75487 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC4O75487 NOC2LP2-201ENST00000407594 1944 ntBASIC18.35■□□□□ 0.53
GPC4O75487 ABALON-201ENST00000629058 1903 ntBASIC18.35■□□□□ 0.53
GPC4O75487 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC4O75487 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.35■□□□□ 0.53
GPC4O75487 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC4O75487 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC4O75487 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC4O75487 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC4O75487 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC4O75487 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms