Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HCN1O60741 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.14■□□□□ 0.33
HCN1O60741 WWOX-216ENST00000569818 525 ntBASIC17.14■□□□□ 0.33
HCN1O60741 AC087388.1-201ENST00000571370 1112 ntBASIC17.14■□□□□ 0.33
HCN1O60741 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HCN1O60741 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCN1O60741 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.14■□□□□ 0.33
HCN1O60741 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HCN1O60741 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCN1O60741 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCN1O60741 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCN1O60741 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCN1O60741 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HCN1O60741 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HCN1O60741 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
HCN1O60741 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
HCN1O60741 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCN1O60741 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HCN1O60741 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HCN1O60741 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.13■□□□□ 0.33
HCN1O60741 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.13■□□□□ 0.33
HCN1O60741 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
HCN1O60741 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCN1O60741 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HCN1O60741 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.13■□□□□ 0.33
HCN1O60741 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.13■□□□□ 0.33
HCN1O60741 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCN1O60741 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCN1O60741 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HCN1O60741 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCN1O60741 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.13■□□□□ 0.33
HCN1O60741 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCN1O60741 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCN1O60741 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.13■□□□□ 0.33
HCN1O60741 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.13■□□□□ 0.33
HCN1O60741 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.13■□□□□ 0.33
HCN1O60741 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.13■□□□□ 0.33
HCN1O60741 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.13■□□□□ 0.33
HCN1O60741 AC140113.3-201ENST00000605663 199 ntBASIC17.13■□□□□ 0.33
HCN1O60741 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HCN1O60741 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HCN1O60741 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCN1O60741 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCN1O60741 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.13■□□□□ 0.33
HCN1O60741 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HCN1O60741 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.13■□□□□ 0.33
HCN1O60741 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCN1O60741 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HCN1O60741 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HCN1O60741 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HCN1O60741 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
HCN1O60741 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCN1O60741 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HCN1O60741 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.12■□□□□ 0.33
HCN1O60741 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.12■□□□□ 0.33
HCN1O60741 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HCN1O60741 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HCN1O60741 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.12■□□□□ 0.33
HCN1O60741 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HCN1O60741 AL354751.1-201ENST00000412768 1863 ntBASIC17.12■□□□□ 0.33
HCN1O60741 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCN1O60741 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.12■□□□□ 0.33
HCN1O60741 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HCN1O60741 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.12■□□□□ 0.33
HCN1O60741 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HCN1O60741 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCN1O60741 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCN1O60741 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCN1O60741 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCN1O60741 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCN1O60741 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HCN1O60741 HOMER2P1-201ENST00000455653 964 ntBASIC17.12■□□□□ 0.33
HCN1O60741 AC092647.4-201ENST00000457211 535 ntBASIC17.12■□□□□ 0.33
HCN1O60741 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.12■□□□□ 0.33
HCN1O60741 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HCN1O60741 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.12■□□□□ 0.33
HCN1O60741 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.12■□□□□ 0.33
HCN1O60741 NEK4P2-201ENST00000580004 1012 ntBASIC17.12■□□□□ 0.33
HCN1O60741 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.12■□□□□ 0.33
HCN1O60741 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HCN1O60741 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
HCN1O60741 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.12■□□□□ 0.33
HCN1O60741 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCN1O60741 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCN1O60741 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCN1O60741 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.12■□□□□ 0.33
HCN1O60741 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.12■□□□□ 0.33
HCN1O60741 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.12■□□□□ 0.33
HCN1O60741 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCN1O60741 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCN1O60741 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
HCN1O60741 KRT8P45-201ENST00000414328 1447 ntBASIC17.12■□□□□ 0.33
HCN1O60741 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HCN1O60741 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HCN1O60741 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
HCN1O60741 BICD1-207ENST00000551848 1962 ntBASIC17.11■□□□□ 0.33
HCN1O60741 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCN1O60741 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HCN1O60741 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.11■□□□□ 0.33
HCN1O60741 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms