Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CTNND1O60716 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTNND1O60716 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.36■■□□□ 1.01
CTNND1O60716 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
CTNND1O60716 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTNND1O60716 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTNND1O60716 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.36■■□□□ 1.01
CTNND1O60716 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.36■■□□□ 1.01
CTNND1O60716 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CTNND1O60716 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
CTNND1O60716 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.36■■□□□ 1.01
CTNND1O60716 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CTNND1O60716 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.36■■□□□ 1.01
CTNND1O60716 AC148477.8-201ENST00000624298 468 ntBASIC21.36■■□□□ 1.01
CTNND1O60716 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.36■■□□□ 1.01
CTNND1O60716 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTNND1O60716 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.36■■□□□ 1.01
CTNND1O60716 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.36■■□□□ 1.01
CTNND1O60716 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTNND1O60716 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CTNND1O60716 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTNND1O60716 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.36■■□□□ 1.01
CTNND1O60716 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CTNND1O60716 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CTNND1O60716 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTNND1O60716 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTNND1O60716 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTNND1O60716 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CTNND1O60716 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTNND1O60716 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CTNND1O60716 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.35■■□□□ 1.01
CTNND1O60716 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTNND1O60716 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.35■■□□□ 1.01
CTNND1O60716 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
CTNND1O60716 MIR574-201ENST00000385209 96 ntBASIC21.35■■□□□ 1.01
CTNND1O60716 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.35■■□□□ 1.01
CTNND1O60716 PMS2P1-201ENST00000431037 1228 ntBASIC21.35■■□□□ 1.01
CTNND1O60716 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.35■■□□□ 1.01
CTNND1O60716 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC21.35■■□□□ 1.01
CTNND1O60716 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.35■■□□□ 1.01
CTNND1O60716 AC009154.2-201ENST00000621177 724 ntBASIC21.35■■□□□ 1.01
CTNND1O60716 AL355877.3-201ENST00000622820 899 ntBASIC21.35■■□□□ 1.01
CTNND1O60716 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.35■■□□□ 1.01
CTNND1O60716 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CTNND1O60716 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTNND1O60716 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CTNND1O60716 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.35■■□□□ 1.01
CTNND1O60716 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTNND1O60716 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTNND1O60716 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTNND1O60716 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTNND1O60716 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTNND1O60716 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CTNND1O60716 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CTNND1O60716 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTNND1O60716 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.34■■□□□ 1.01
CTNND1O60716 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTNND1O60716 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.34■■□□□ 1.01
CTNND1O60716 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.34■■□□□ 1.01
CTNND1O60716 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.34■■□□□ 1.01
CTNND1O60716 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CTNND1O60716 AC009533.2-201ENST00000543664 586 ntBASIC21.34■■□□□ 1.01
CTNND1O60716 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC21.34■■□□□ 1.01
CTNND1O60716 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CTNND1O60716 AC117500.6-201ENST00000624871 588 ntBASIC21.34■■□□□ 1.01
CTNND1O60716 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.34■■□□□ 1.01
CTNND1O60716 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CTNND1O60716 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTNND1O60716 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTNND1O60716 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTNND1O60716 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTNND1O60716 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTNND1O60716 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTNND1O60716 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTNND1O60716 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CTNND1O60716 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CTNND1O60716 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.34■■□□□ 1.01
CTNND1O60716 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTNND1O60716 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTNND1O60716 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CTNND1O60716 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CTNND1O60716 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CTNND1O60716 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.33■■□□□ 1.01
CTNND1O60716 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CTNND1O60716 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CTNND1O60716 RBM17P3-201ENST00000417687 1192 ntBASIC21.33■■□□□ 1.01
CTNND1O60716 MTCL1P1-201ENST00000446207 792 ntBASIC21.33■■□□□ 1.01
CTNND1O60716 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CTNND1O60716 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.33■■□□□ 1.01
CTNND1O60716 AC018712.1-201ENST00000455767 687 ntBASIC21.33■■□□□ 1.01
CTNND1O60716 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.33■■□□□ 1.01
CTNND1O60716 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CTNND1O60716 AC099343.3-201ENST00000605834 2503 ntBASIC21.33■■□□□ 1
CTNND1O60716 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
CTNND1O60716 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CTNND1O60716 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
CTNND1O60716 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.33■■□□□ 1
CTNND1O60716 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.33■■□□□ 1
CTNND1O60716 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.32■■□□□ 1
CTNND1O60716 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms