Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
HOXA2O43364 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXA2O43364 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.56■□□□□ 0.72
HOXA2O43364 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.56■□□□□ 0.72
HOXA2O43364 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
HOXA2O43364 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HOXA2O43364 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXA2O43364 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HOXA2O43364 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
HOXA2O43364 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HOXA2O43364 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HOXA2O43364 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
HOXA2O43364 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXA2O43364 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.56■□□□□ 0.72
HOXA2O43364 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
HOXA2O43364 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXA2O43364 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.56■□□□□ 0.72
HOXA2O43364 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
HOXA2O43364 KRT18P65-201ENST00000439811 1286 ntBASIC19.56■□□□□ 0.72
HOXA2O43364 SCARNA2-201ENST00000458748 420 ntBASIC19.56■□□□□ 0.72
HOXA2O43364 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.56■□□□□ 0.72
HOXA2O43364 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.56■□□□□ 0.72
HOXA2O43364 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
HOXA2O43364 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.56■□□□□ 0.72
HOXA2O43364 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.56■□□□□ 0.72
HOXA2O43364 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.56■□□□□ 0.72
HOXA2O43364 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
HOXA2O43364 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXA2O43364 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HOXA2O43364 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
HOXA2O43364 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
HOXA2O43364 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.56■□□□□ 0.72
HOXA2O43364 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.56■□□□□ 0.72
HOXA2O43364 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.55■□□□□ 0.72
HOXA2O43364 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA2O43364 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA2O43364 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
HOXA2O43364 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA2O43364 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.55■□□□□ 0.72
HOXA2O43364 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA2O43364 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.55■□□□□ 0.72
HOXA2O43364 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.55■□□□□ 0.72
HOXA2O43364 PMS2P1-201ENST00000431037 1228 ntBASIC19.55■□□□□ 0.72
HOXA2O43364 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA2O43364 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA2O43364 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.55■□□□□ 0.72
HOXA2O43364 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.55■□□□□ 0.72
HOXA2O43364 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.55■□□□□ 0.72
HOXA2O43364 AC073648.2-201ENST00000510116 352 ntBASIC19.55■□□□□ 0.72
HOXA2O43364 RNA5SP419-201ENST00000515908 135 ntBASIC19.55■□□□□ 0.72
HOXA2O43364 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA2O43364 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HOXA2O43364 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA2O43364 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.55■□□□□ 0.72
HOXA2O43364 AL138831.2-201ENST00000606564 490 ntBASIC19.55■□□□□ 0.72
HOXA2O43364 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
HOXA2O43364 AC117500.6-201ENST00000624871 588 ntBASIC19.55■□□□□ 0.72
HOXA2O43364 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HOXA2O43364 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
HOXA2O43364 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HOXA2O43364 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA2O43364 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
HOXA2O43364 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA2O43364 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA2O43364 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HOXA2O43364 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.55■□□□□ 0.72
HOXA2O43364 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.55■□□□□ 0.72
HOXA2O43364 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXA2O43364 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA2O43364 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA2O43364 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA2O43364 IL9RP2-201ENST00000423948 1312 ntBASIC19.54■□□□□ 0.72
HOXA2O43364 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
HOXA2O43364 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HOXA2O43364 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA2O43364 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA2O43364 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA2O43364 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
HOXA2O43364 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA2O43364 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.54■□□□□ 0.72
HOXA2O43364 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HOXA2O43364 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
HOXA2O43364 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXA2O43364 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.54■□□□□ 0.72
HOXA2O43364 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.54■□□□□ 0.72
HOXA2O43364 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXA2O43364 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXA2O43364 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.54■□□□□ 0.72
HOXA2O43364 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.54■□□□□ 0.72
HOXA2O43364 GPALPP1-207ENST00000611650 899 ntBASIC19.54■□□□□ 0.72
HOXA2O43364 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA2O43364 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA2O43364 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXA2O43364 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA2O43364 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA2O43364 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA2O43364 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA2O43364 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA2O43364 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXA2O43364 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms