Protein–RNA interactions for Protein: O15467

CCL16, C-C motif chemokine 16, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16O15467 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCL16O15467 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.06■□□□□ 0.64
CCL16O15467 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCL16O15467 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCL16O15467 AC112777.1-201ENST00000540175 1423 ntBASIC19.06■□□□□ 0.64
CCL16O15467 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.06■□□□□ 0.64
CCL16O15467 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.06■□□□□ 0.64
CCL16O15467 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.06■□□□□ 0.64
CCL16O15467 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCL16O15467 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCL16O15467 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCL16O15467 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCL16O15467 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.05■□□□□ 0.64
CCL16O15467 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCL16O15467 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CCL16O15467 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.05■□□□□ 0.64
CCL16O15467 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.05■□□□□ 0.64
CCL16O15467 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCL16O15467 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.05■□□□□ 0.64
CCL16O15467 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCL16O15467 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCL16O15467 KRT18P67-201ENST00000432816 1264 ntBASIC19.05■□□□□ 0.64
CCL16O15467 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.05■□□□□ 0.64
CCL16O15467 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCL16O15467 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCL16O15467 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.05■□□□□ 0.64
CCL16O15467 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.05■□□□□ 0.64
CCL16O15467 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.05■□□□□ 0.64
CCL16O15467 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.05■□□□□ 0.64
CCL16O15467 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.05■□□□□ 0.64
CCL16O15467 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.05■□□□□ 0.64
CCL16O15467 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.05■□□□□ 0.64
CCL16O15467 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.05■□□□□ 0.64
CCL16O15467 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCL16O15467 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCL16O15467 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.05■□□□□ 0.64
CCL16O15467 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.05■□□□□ 0.64
CCL16O15467 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
CCL16O15467 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.05■□□□□ 0.64
CCL16O15467 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCL16O15467 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CCL16O15467 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.05■□□□□ 0.64
CCL16O15467 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.04■□□□□ 0.64
CCL16O15467 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL16O15467 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL16O15467 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL16O15467 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL16O15467 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.04■□□□□ 0.64
CCL16O15467 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.04■□□□□ 0.64
CCL16O15467 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.04■□□□□ 0.64
CCL16O15467 LINC00602-201ENST00000629776 2065 ntBASIC19.04■□□□□ 0.64
CCL16O15467 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL16O15467 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCL16O15467 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL16O15467 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.04■□□□□ 0.64
CCL16O15467 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCL16O15467 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.04■□□□□ 0.64
CCL16O15467 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
CCL16O15467 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.04■□□□□ 0.64
CCL16O15467 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL16O15467 SLC25A1P1-201ENST00000528351 927 ntBASIC19.04■□□□□ 0.64
CCL16O15467 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCL16O15467 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.04■□□□□ 0.64
CCL16O15467 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL16O15467 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCL16O15467 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
CCL16O15467 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.04■□□□□ 0.64
CCL16O15467 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCL16O15467 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.04■□□□□ 0.64
CCL16O15467 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCL16O15467 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL16O15467 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL16O15467 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL16O15467 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCL16O15467 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCL16O15467 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL16O15467 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCL16O15467 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL16O15467 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.03■□□□□ 0.64
CCL16O15467 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL16O15467 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.03■□□□□ 0.64
CCL16O15467 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.03■□□□□ 0.64
CCL16O15467 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.03■□□□□ 0.64
CCL16O15467 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CCL16O15467 AC006538.3-201ENST00000612495 578 ntBASIC19.03■□□□□ 0.64
CCL16O15467 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.03■□□□□ 0.64
CCL16O15467 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
CCL16O15467 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL16O15467 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCL16O15467 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL16O15467 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCL16O15467 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL16O15467 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL16O15467 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CCL16O15467 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCL16O15467 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL16O15467 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL16O15467 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CCL16O15467 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL16O15467 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms