Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 RPS2P52-201ENST00000469610 820 ntBASIC13.04□□□□□ -0.32
LINC01549A6NIU2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 AL391005.1-201ENST00000623953 2435 ntBASIC13.04□□□□□ -0.32
LINC01549A6NIU2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01549A6NIU2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 AP000593.1-201ENST00000393668 712 ntBASIC13.03□□□□□ -0.32
LINC01549A6NIU2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 KRT18P41-201ENST00000518924 1277 ntBASIC13.03□□□□□ -0.32
LINC01549A6NIU2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC01549A6NIU2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC01549A6NIU2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC01549A6NIU2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LINC01549A6NIU2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
LINC01549A6NIU2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC01549A6NIU2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.32
LINC01549A6NIU2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.02□□□□□ -0.32
LINC01549A6NIU2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC01549A6NIU2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.02□□□□□ -0.32
LINC01549A6NIU2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.02□□□□□ -0.32
LINC01549A6NIU2 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 CNN2P6-201ENST00000439038 900 ntBASIC13.02□□□□□ -0.33
LINC01549A6NIU2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.02□□□□□ -0.33
LINC01549A6NIU2 AC231657.2-201ENST00000624556 255 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms