Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
LINC00862A6NCI5 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LINC00862A6NCI5 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LINC00862A6NCI5 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 FER1L4-210ENST00000615531 5998 ntBASIC14.87□□□□□ -0.03
LINC00862A6NCI5 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 HEIH-201ENST00000623091 1652 ntBASIC14.87□□□□□ -0.03
LINC00862A6NCI5 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00862A6NCI5 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 AL355312.1-201ENST00000407115 2176 ntBASIC14.86□□□□□ -0.03
LINC00862A6NCI5 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 AC092171.4-201ENST00000609130 632 ntBASIC14.86□□□□□ -0.03
LINC00862A6NCI5 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00862A6NCI5 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00862A6NCI5 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms