Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.03■□□□□ 0.8
SCN10AQ9Y5Y9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN10AQ9Y5Y9 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.03■□□□□ 0.8
SCN10AQ9Y5Y9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN10AQ9Y5Y9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN10AQ9Y5Y9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SCN10AQ9Y5Y9 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN10AQ9Y5Y9 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.03■□□□□ 0.8
SCN10AQ9Y5Y9 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.03■□□□□ 0.8
SCN10AQ9Y5Y9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCN10AQ9Y5Y9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.03■□□□□ 0.8
SCN10AQ9Y5Y9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 AC034105.1-201ENST00000563488 319 ntBASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 AC008735.5-201ENST00000623544 497 ntBASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN10AQ9Y5Y9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.02■□□□□ 0.79
SCN10AQ9Y5Y9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SCN10AQ9Y5Y9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.02■□□□□ 0.79
SCN10AQ9Y5Y9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 AC112698.1-201ENST00000510299 916 ntBASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 AC116407.3-201ENST00000623905 1129 ntBASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 RPS2P1-201ENST00000434010 821 ntBASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.01■□□□□ 0.79
SCN10AQ9Y5Y9 PMS2P7-201ENST00000506558 1336 ntBASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 BX842568.4-201ENST00000421222 227 ntBASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 OR7E14P-202ENST00000530490 1290 ntBASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 AC140113.2-201ENST00000604370 208 ntBASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCN10AQ9Y5Y9 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms