Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 NSUN5P1-202ENST00000421140 1535 ntBASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 NSUN5P2-203ENST00000457352 1529 ntBASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 AKR1C7P-201ENST00000305623 895 ntBASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 AC023511.2-201ENST00000618803 211 ntBASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.14■□□□□ 0.5
SNX11Q9Y5W9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SNX11Q9Y5W9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.14■□□□□ 0.5
SNX11Q9Y5W9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
SNX11Q9Y5W9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 FP475955.4-201ENST00000623131 1990 ntBASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 VENTXP7-201ENST00000475503 772 ntBASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 AC091607.1-201ENST00000490318 1060 ntBASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 AP005901.3-202ENST00000581653 237 ntBASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 AL353692.3-201ENST00000407031 1396 ntBASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNX11Q9Y5W9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 NUS1P2-201ENST00000417358 873 ntBASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 AC004263.2-201ENST00000617183 678 ntBASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 AC068587.9-201ENST00000641814 219 ntBASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX11Q9Y5W9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms