Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHB11Q9Y5F2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 ATP5G2P1-201ENST00000433580 426 ntBASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 KRT18P23-201ENST00000435622 1283 ntBASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 HCG11-201ENST00000411553 5696 ntBASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 ANO7L1-203ENST00000602586 1720 ntBASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 HOXB1-202ENST00000577092 1414 ntBASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB11Q9Y5F2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 AC005082.1-201ENST00000413042 2259 ntBASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 KRT18P41-201ENST00000518924 1277 ntBASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 AC112497.1-201ENST00000624824 639 ntBASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 AC112777.1-201ENST00000540175 1423 ntBASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB11Q9Y5F2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PCDHB11Q9Y5F2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.96■□□□□ 0.46
PCDHB11Q9Y5F2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PCDHB11Q9Y5F2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
PCDHB11Q9Y5F2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
PCDHB11Q9Y5F2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 AC020763.4-201ENST00000623414 4170 ntBASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB11Q9Y5F2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms