Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC13.19□□□□□ -0.3
CHTOPQ9Y3Y2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC13.19□□□□□ -0.3
CHTOPQ9Y3Y2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.19□□□□□ -0.3
CHTOPQ9Y3Y2 AC105020.6-201ENST00000621523 1217 ntBASIC13.19□□□□□ -0.3
CHTOPQ9Y3Y2 MIR6084-201ENST00000622012 110 ntBASIC13.19□□□□□ -0.3
CHTOPQ9Y3Y2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
CHTOPQ9Y3Y2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHTOPQ9Y3Y2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CHTOPQ9Y3Y2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHTOPQ9Y3Y2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHTOPQ9Y3Y2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CHTOPQ9Y3Y2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC13.19□□□□□ -0.3
CHTOPQ9Y3Y2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CHTOPQ9Y3Y2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHTOPQ9Y3Y2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHTOPQ9Y3Y2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHTOPQ9Y3Y2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CHTOPQ9Y3Y2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHTOPQ9Y3Y2 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHTOPQ9Y3Y2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHTOPQ9Y3Y2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 CR383656.2-201ENST00000548656 2254 ntBASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 AC099063.4-201ENST00000641099 1602 ntBASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 MCRIP2P1-201ENST00000394346 511 ntBASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CHTOPQ9Y3Y2 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 NME4-202ENST00000382940 766 ntTSL 3 BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 AL035685.1-201ENST00000636663 812 ntBASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms