Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC23.07■■□□□ 1.28
RTCBQ9Y3I0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC23.07■■□□□ 1.28
RTCBQ9Y3I0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
RTCBQ9Y3I0 MIR3687-1-201ENST00000614492 61 ntBASIC23.07■■□□□ 1.28
RTCBQ9Y3I0 AL139288.1-201ENST00000623748 933 ntBASIC23.07■■□□□ 1.28
RTCBQ9Y3I0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTCBQ9Y3I0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTCBQ9Y3I0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTCBQ9Y3I0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RTCBQ9Y3I0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTCBQ9Y3I0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTCBQ9Y3I0 SDHAP2-201ENST00000455183 2001 ntBASIC23.06■■□□□ 1.28
RTCBQ9Y3I0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.06■■□□□ 1.28
RTCBQ9Y3I0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTCBQ9Y3I0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23.06■■□□□ 1.28
RTCBQ9Y3I0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
RTCBQ9Y3I0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTCBQ9Y3I0 DNAJB3-201ENST00000446806 729 ntBASIC23.06■■□□□ 1.28
RTCBQ9Y3I0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC23.06■■□□□ 1.28
RTCBQ9Y3I0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RTCBQ9Y3I0 DHDH-204ENST00000523250 634 ntTSL 5 BASIC23.06■■□□□ 1.28
RTCBQ9Y3I0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC23.06■■□□□ 1.28
RTCBQ9Y3I0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
RTCBQ9Y3I0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
RTCBQ9Y3I0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTCBQ9Y3I0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RTCBQ9Y3I0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
RTCBQ9Y3I0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RTCBQ9Y3I0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTCBQ9Y3I0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTCBQ9Y3I0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
RTCBQ9Y3I0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTCBQ9Y3I0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTCBQ9Y3I0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC23.05■■□□□ 1.28
RTCBQ9Y3I0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTCBQ9Y3I0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTCBQ9Y3I0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTCBQ9Y3I0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RTCBQ9Y3I0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC23.05■■□□□ 1.28
RTCBQ9Y3I0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTCBQ9Y3I0 AC083906.6-201ENST00000641366 219 ntBASIC23.05■■□□□ 1.28
RTCBQ9Y3I0 AC079781.4-201ENST00000641908 219 ntBASIC23.05■■□□□ 1.28
RTCBQ9Y3I0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RTCBQ9Y3I0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.05■■□□□ 1.28
RTCBQ9Y3I0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTCBQ9Y3I0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTCBQ9Y3I0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTCBQ9Y3I0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RTCBQ9Y3I0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
RTCBQ9Y3I0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC23.05■■□□□ 1.28
RTCBQ9Y3I0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTCBQ9Y3I0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RTCBQ9Y3I0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
RTCBQ9Y3I0 PCDHAC2-203ENST00000615316 3011 ntBASIC23.04■■□□□ 1.28
RTCBQ9Y3I0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTCBQ9Y3I0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RTCBQ9Y3I0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
RTCBQ9Y3I0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTCBQ9Y3I0 AC105339.3-201ENST00000560043 636 ntBASIC23.04■■□□□ 1.28
RTCBQ9Y3I0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RTCBQ9Y3I0 AC027796.2-201ENST00000575326 344 ntBASIC23.04■■□□□ 1.28
RTCBQ9Y3I0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC23.04■■□□□ 1.28
RTCBQ9Y3I0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
RTCBQ9Y3I0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RTCBQ9Y3I0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.04■■□□□ 1.28
RTCBQ9Y3I0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RTCBQ9Y3I0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTCBQ9Y3I0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTCBQ9Y3I0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 AC004967.1-201ENST00000453589 447 ntBASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 HS6ST1P1-201ENST00000481504 1234 ntBASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 UNC93B6-202ENST00000528242 690 ntBASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 LINC00602-201ENST00000629776 2065 ntBASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
RTCBQ9Y3I0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms