Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SMC3Q9UQE7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMC3Q9UQE7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMC3Q9UQE7 LTB4R2-202ENST00000528054 3092 ntBASIC21.56■■□□□ 1.04
SMC3Q9UQE7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SMC3Q9UQE7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SMC3Q9UQE7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMC3Q9UQE7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMC3Q9UQE7 CRYGFP-201ENST00000418459 633 ntBASIC21.56■■□□□ 1.04
SMC3Q9UQE7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMC3Q9UQE7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SMC3Q9UQE7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.56■■□□□ 1.04
SMC3Q9UQE7 MIR3180-5-201ENST00000583743 153 ntBASIC21.56■■□□□ 1.04
SMC3Q9UQE7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.56■■□□□ 1.04
SMC3Q9UQE7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.56■■□□□ 1.04
SMC3Q9UQE7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SMC3Q9UQE7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMC3Q9UQE7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMC3Q9UQE7 FLJ13224-201ENST00000313737 1514 ntBASIC21.55■■□□□ 1.04
SMC3Q9UQE7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMC3Q9UQE7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMC3Q9UQE7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SMC3Q9UQE7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMC3Q9UQE7 ABHD17AP1-201ENST00000358206 933 ntBASIC21.55■■□□□ 1.04
SMC3Q9UQE7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMC3Q9UQE7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.55■■□□□ 1.04
SMC3Q9UQE7 REXO1L10P-201ENST00000615707 1290 ntBASIC21.55■■□□□ 1.04
SMC3Q9UQE7 REXO1L12P-201ENST00000622156 912 ntBASIC21.55■■□□□ 1.04
SMC3Q9UQE7 AC113410.3-201ENST00000623366 203 ntBASIC21.55■■□□□ 1.04
SMC3Q9UQE7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.55■■□□□ 1.04
SMC3Q9UQE7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMC3Q9UQE7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMC3Q9UQE7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMC3Q9UQE7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.55■■□□□ 1.04
SMC3Q9UQE7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMC3Q9UQE7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMC3Q9UQE7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMC3Q9UQE7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMC3Q9UQE7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMC3Q9UQE7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMC3Q9UQE7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMC3Q9UQE7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SMC3Q9UQE7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 PHGDH-209ENST00000641074 1780 ntBASIC21.54■■□□□ 1.04
SMC3Q9UQE7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 AL158047.1-201ENST00000445918 881 ntBASIC21.54■■□□□ 1.04
SMC3Q9UQE7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 MIR4674-201ENST00000582457 87 ntBASIC21.54■■□□□ 1.04
SMC3Q9UQE7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SMC3Q9UQE7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 UBE2SP1-201ENST00000450587 669 ntBASIC21.53■■□□□ 1.04
SMC3Q9UQE7 AC098590.1-201ENST00000468126 897 ntBASIC21.53■■□□□ 1.04
SMC3Q9UQE7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 AP001412.1-201ENST00000608405 714 ntBASIC21.53■■□□□ 1.04
SMC3Q9UQE7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SMC3Q9UQE7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms