Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC007613.1-201ENST00000572811 2597 ntBASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 COX11P1-201ENST00000489116 835 ntBASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4E1Q9UPM8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 AC138932.1-201ENST00000534164 6830 ntBASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 AC140113.3-201ENST00000605663 199 ntBASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 AL157888.1-201ENST00000631930 593 ntBASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
AP4E1Q9UPM8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 BX664615.1-201ENST00000443558 458 ntBASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 AL441883.1-201ENST00000566170 1045 ntBASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP4E1Q9UPM8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
AP4E1Q9UPM8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
AP4E1Q9UPM8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.02■□□□□ 0.63
AP4E1Q9UPM8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
AP4E1Q9UPM8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms