Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 AC104692.2-201ENST00000603054 253 ntBASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPO2Q9UMS6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SYNPO2Q9UMS6 AC125634.1-201ENST00000438758 1403 ntBASIC21.04■□□□□ 0.96
SYNPO2Q9UMS6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SYNPO2Q9UMS6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SYNPO2Q9UMS6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.04■□□□□ 0.96
SYNPO2Q9UMS6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SYNPO2Q9UMS6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SYNPO2Q9UMS6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SYNPO2Q9UMS6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.04■□□□□ 0.96
SYNPO2Q9UMS6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SYNPO2Q9UMS6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.04■□□□□ 0.96
SYNPO2Q9UMS6 FDX1P1-201ENST00000449115 551 ntBASIC21.04■□□□□ 0.96
SYNPO2Q9UMS6 EMBP1-201ENST00000458200 901 ntBASIC21.04■□□□□ 0.96
SYNPO2Q9UMS6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.04■□□□□ 0.96
SYNPO2Q9UMS6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.04■□□□□ 0.96
SYNPO2Q9UMS6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.04■□□□□ 0.96
SYNPO2Q9UMS6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SYNPO2Q9UMS6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
SYNPO2Q9UMS6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SYNPO2Q9UMS6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SYNPO2Q9UMS6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SYNPO2Q9UMS6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SYNPO2Q9UMS6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 NUS1P2-201ENST00000417358 873 ntBASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 SAPCD2P3-201ENST00000455031 850 ntBASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 MIR5100-201ENST00000579544 119 ntBASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SYNPO2Q9UMS6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SYNPO2Q9UMS6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SYNPO2Q9UMS6 ESPNP-201ENST00000270691 2015 ntBASIC21.02■□□□□ 0.96
SYNPO2Q9UMS6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.02■□□□□ 0.96
SYNPO2Q9UMS6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.02■□□□□ 0.96
SYNPO2Q9UMS6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SYNPO2Q9UMS6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SYNPO2Q9UMS6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.02■□□□□ 0.96
SYNPO2Q9UMS6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.02■□□□□ 0.96
SYNPO2Q9UMS6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.02■□□□□ 0.96
SYNPO2Q9UMS6 AC106795.1-205ENST00000512851 1056 ntBASIC21.02■□□□□ 0.96
SYNPO2Q9UMS6 AL160237.2-201ENST00000556165 472 ntBASIC21.02■□□□□ 0.96
SYNPO2Q9UMS6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.02■□□□□ 0.96
SYNPO2Q9UMS6 AC011467.2-201ENST00000598425 242 ntBASIC21.02■□□□□ 0.96
SYNPO2Q9UMS6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.02■□□□□ 0.96
SYNPO2Q9UMS6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SYNPO2Q9UMS6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SYNPO2Q9UMS6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SYNPO2Q9UMS6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SYNPO2Q9UMS6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SYNPO2Q9UMS6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SYNPO2Q9UMS6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms