Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 KRT18P56-201ENST00000507275 550 ntBASIC19.34■□□□□ 0.69
CDH9Q9ULB4 GUSBP12-201ENST00000513727 720 ntBASIC19.34■□□□□ 0.69
CDH9Q9ULB4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 AC092329.2-201ENST00000598402 547 ntBASIC19.34■□□□□ 0.69
CDH9Q9ULB4 IGHV3-41-201ENST00000613121 348 ntBASIC19.34■□□□□ 0.69
CDH9Q9ULB4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDH9Q9ULB4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CDH9Q9ULB4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH9Q9ULB4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDH9Q9ULB4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDH9Q9ULB4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CDH9Q9ULB4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH9Q9ULB4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CDH9Q9ULB4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CDH9Q9ULB4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDH9Q9ULB4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH9Q9ULB4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.33■□□□□ 0.68
CDH9Q9ULB4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.33■□□□□ 0.68
CDH9Q9ULB4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDH9Q9ULB4 DRAXINP1-201ENST00000437611 948 ntBASIC19.33■□□□□ 0.68
CDH9Q9ULB4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDH9Q9ULB4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CDH9Q9ULB4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.33■□□□□ 0.68
CDH9Q9ULB4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.33■□□□□ 0.68
CDH9Q9ULB4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH9Q9ULB4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CDH9Q9ULB4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDH9Q9ULB4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CDH9Q9ULB4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH9Q9ULB4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
CDH9Q9ULB4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.33■□□□□ 0.68
CDH9Q9ULB4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CDH9Q9ULB4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 WIZP1-201ENST00000531444 2299 ntBASIC19.32■□□□□ 0.68
CDH9Q9ULB4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 AL138781.2-201ENST00000617896 1843 ntBASIC19.32■□□□□ 0.68
CDH9Q9ULB4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDH9Q9ULB4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.31■□□□□ 0.68
CDH9Q9ULB4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 RN7SL606P-201ENST00000472779 293 ntBASIC19.31■□□□□ 0.68
CDH9Q9ULB4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms