Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.23■□□□□ 0.35
CTSFQ9UBX1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSFQ9UBX1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSFQ9UBX1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSFQ9UBX1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTSFQ9UBX1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSFQ9UBX1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSFQ9UBX1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSFQ9UBX1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CTSFQ9UBX1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSFQ9UBX1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.22■□□□□ 0.35
CTSFQ9UBX1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.22■□□□□ 0.35
CTSFQ9UBX1 KRT126P-201ENST00000549467 1181 ntBASIC17.22■□□□□ 0.35
CTSFQ9UBX1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CTSFQ9UBX1 KRT89P-201ENST00000620027 1478 ntBASIC17.22■□□□□ 0.35
CTSFQ9UBX1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSFQ9UBX1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTSFQ9UBX1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTSFQ9UBX1 AP000974.1-201ENST00000623909 2387 ntBASIC17.22■□□□□ 0.35
CTSFQ9UBX1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTSFQ9UBX1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 TPSP2-201ENST00000561760 610 ntBASIC17.21■□□□□ 0.35
CTSFQ9UBX1 MIR3652-201ENST00000579335 131 ntBASIC17.21■□□□□ 0.35
CTSFQ9UBX1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CTSFQ9UBX1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
CTSFQ9UBX1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CTSFQ9UBX1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CTSFQ9UBX1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTSFQ9UBX1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTSFQ9UBX1 AL024508.2-201ENST00000607749 1894 ntBASIC17.2■□□□□ 0.34
CTSFQ9UBX1 AL031598.1-201ENST00000561511 1773 ntBASIC17.2■□□□□ 0.34
CTSFQ9UBX1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms