Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ECHDC1Q9NTX5 LY6E-213ENST00000522528 606 ntTSL 3 BASIC22.33■■□□□ 1.17
ECHDC1Q9NTX5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ECHDC1Q9NTX5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
ECHDC1Q9NTX5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ECHDC1Q9NTX5 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
ECHDC1Q9NTX5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
ECHDC1Q9NTX5 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.16
ECHDC1Q9NTX5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
ECHDC1Q9NTX5 LINC01311-201ENST00000565162 1445 ntBASIC22.32■■□□□ 1.16
ECHDC1Q9NTX5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ECHDC1Q9NTX5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
ECHDC1Q9NTX5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ECHDC1Q9NTX5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ECHDC1Q9NTX5 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ECHDC1Q9NTX5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ECHDC1Q9NTX5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ECHDC1Q9NTX5 AL671277.2-201ENST00000458060 996 ntBASIC22.32■■□□□ 1.16
ECHDC1Q9NTX5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC22.32■■□□□ 1.16
ECHDC1Q9NTX5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ECHDC1Q9NTX5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ECHDC1Q9NTX5 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
ECHDC1Q9NTX5 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ECHDC1Q9NTX5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC22.32■■□□□ 1.16
ECHDC1Q9NTX5 AL354751.1-201ENST00000412768 1863 ntBASIC22.32■■□□□ 1.16
ECHDC1Q9NTX5 POR-209ENST00000439269 1858 ntTSL 2 BASIC22.32■■□□□ 1.16
ECHDC1Q9NTX5 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ECHDC1Q9NTX5 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ECHDC1Q9NTX5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
ECHDC1Q9NTX5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
ECHDC1Q9NTX5 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC22.31■■□□□ 1.16
ECHDC1Q9NTX5 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ECHDC1Q9NTX5 SPDYE13P-201ENST00000445314 798 ntBASIC22.31■■□□□ 1.16
ECHDC1Q9NTX5 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC22.31■■□□□ 1.16
ECHDC1Q9NTX5 TK1-205ENST00000590862 642 ntTSL 3 BASIC22.31■■□□□ 1.16
ECHDC1Q9NTX5 AC083849.1-201ENST00000615227 514 ntBASIC22.31■■□□□ 1.16
ECHDC1Q9NTX5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
ECHDC1Q9NTX5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC22.31■■□□□ 1.16
ECHDC1Q9NTX5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC22.31■■□□□ 1.16
ECHDC1Q9NTX5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ECHDC1Q9NTX5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC22.31■■□□□ 1.16
ECHDC1Q9NTX5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ECHDC1Q9NTX5 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ECHDC1Q9NTX5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ECHDC1Q9NTX5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ECHDC1Q9NTX5 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ECHDC1Q9NTX5 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ECHDC1Q9NTX5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC22.31■■□□□ 1.16
ECHDC1Q9NTX5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC22.31■■□□□ 1.16
ECHDC1Q9NTX5 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 NTF6B-201ENST00000591913 560 ntBASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ECHDC1Q9NTX5 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 ABALON-201ENST00000629058 1903 ntBASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 VENTXP5-201ENST00000523979 775 ntBASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 AC024563.2-201ENST00000603282 481 ntBASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 AL590326.2-201ENST00000625139 305 ntBASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ECHDC1Q9NTX5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms