Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 HEIH-201ENST00000623091 1652 ntBASIC18.96■□□□□ 0.63
HPS4Q9NQG7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPS4Q9NQG7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPS4Q9NQG7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPS4Q9NQG7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.95■□□□□ 0.62
HPS4Q9NQG7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.95■□□□□ 0.62
HPS4Q9NQG7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HPS4Q9NQG7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HPS4Q9NQG7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HPS4Q9NQG7 AL032819.2-201ENST00000624543 2162 ntBASIC18.95■□□□□ 0.62
HPS4Q9NQG7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.95■□□□□ 0.62
HPS4Q9NQG7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPS4Q9NQG7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPS4Q9NQG7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
HPS4Q9NQG7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPS4Q9NQG7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPS4Q9NQG7 IGHV3-47-201ENST00000425060 335 ntBASIC18.95■□□□□ 0.62
HPS4Q9NQG7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.95■□□□□ 0.62
HPS4Q9NQG7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
HPS4Q9NQG7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
HPS4Q9NQG7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.95■□□□□ 0.62
HPS4Q9NQG7 AC124864.1-201ENST00000623408 392 ntBASIC18.95■□□□□ 0.62
HPS4Q9NQG7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPS4Q9NQG7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPS4Q9NQG7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPS4Q9NQG7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HPS4Q9NQG7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HPS4Q9NQG7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPS4Q9NQG7 MTMR9LP-203ENST00000426597 1545 ntBASIC18.95■□□□□ 0.62
HPS4Q9NQG7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPS4Q9NQG7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.94■□□□□ 0.62
HPS4Q9NQG7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.94■□□□□ 0.62
HPS4Q9NQG7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPS4Q9NQG7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.94■□□□□ 0.62
HPS4Q9NQG7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HPS4Q9NQG7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPS4Q9NQG7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPS4Q9NQG7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HPS4Q9NQG7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.94■□□□□ 0.62
HPS4Q9NQG7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.94■□□□□ 0.62
HPS4Q9NQG7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.94■□□□□ 0.62
HPS4Q9NQG7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.94■□□□□ 0.62
HPS4Q9NQG7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.94■□□□□ 0.62
HPS4Q9NQG7 AL160237.2-201ENST00000556165 472 ntBASIC18.94■□□□□ 0.62
HPS4Q9NQG7 AP005901.3-202ENST00000581653 237 ntBASIC18.94■□□□□ 0.62
HPS4Q9NQG7 Z69720.1-201ENST00000601483 472 ntBASIC18.94■□□□□ 0.62
HPS4Q9NQG7 AC099336.1-202ENST00000602961 463 ntBASIC18.94■□□□□ 0.62
HPS4Q9NQG7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.94■□□□□ 0.62
HPS4Q9NQG7 AP000974.1-201ENST00000623909 2387 ntBASIC18.94■□□□□ 0.62
HPS4Q9NQG7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HPS4Q9NQG7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPS4Q9NQG7 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.94■□□□□ 0.62
HPS4Q9NQG7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPS4Q9NQG7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.94■□□□□ 0.62
HPS4Q9NQG7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPS4Q9NQG7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPS4Q9NQG7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPS4Q9NQG7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HPS4Q9NQG7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 TNXA-203ENST00000507684 2038 ntBASIC18.93■□□□□ 0.62
HPS4Q9NQG7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 AC091607.1-201ENST00000490318 1060 ntBASIC18.93■□□□□ 0.62
HPS4Q9NQG7 GUSBP12-201ENST00000513727 720 ntBASIC18.93■□□□□ 0.62
HPS4Q9NQG7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms