Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZFYVE28Q9HCC9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZFYVE28Q9HCC9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.89■□□□□ 0.93
ZFYVE28Q9HCC9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.89■□□□□ 0.93
ZFYVE28Q9HCC9 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.89■□□□□ 0.93
ZFYVE28Q9HCC9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.89■□□□□ 0.93
ZFYVE28Q9HCC9 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.89■□□□□ 0.93
ZFYVE28Q9HCC9 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.89■□□□□ 0.93
ZFYVE28Q9HCC9 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.89■□□□□ 0.93
ZFYVE28Q9HCC9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.89■□□□□ 0.93
ZFYVE28Q9HCC9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZFYVE28Q9HCC9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZFYVE28Q9HCC9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
ZFYVE28Q9HCC9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZFYVE28Q9HCC9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZFYVE28Q9HCC9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZFYVE28Q9HCC9 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZFYVE28Q9HCC9 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZFYVE28Q9HCC9 AC141586.3-201ENST00000562166 1838 ntBASIC20.88■□□□□ 0.93
ZFYVE28Q9HCC9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
ZFYVE28Q9HCC9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ZFYVE28Q9HCC9 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZFYVE28Q9HCC9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.88■□□□□ 0.93
ZFYVE28Q9HCC9 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZFYVE28Q9HCC9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZFYVE28Q9HCC9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.88■□□□□ 0.93
ZFYVE28Q9HCC9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.88■□□□□ 0.93
ZFYVE28Q9HCC9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.88■□□□□ 0.93
ZFYVE28Q9HCC9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZFYVE28Q9HCC9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZFYVE28Q9HCC9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZFYVE28Q9HCC9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZFYVE28Q9HCC9 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZFYVE28Q9HCC9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 AP006288.1-201ENST00000446065 395 ntBASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 MIR3197-201ENST00000582241 73 ntBASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZFYVE28Q9HCC9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 LAGE3P1-201ENST00000425356 484 ntBASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 AC009947.1-201ENST00000444350 727 ntBASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 MTMR9LP-203ENST00000426597 1545 ntBASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.86■□□□□ 0.93
ZFYVE28Q9HCC9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms