Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ABCA3Q99758 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC24.31■■□□□ 1.48
ABCA3Q99758 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC24.31■■□□□ 1.48
ABCA3Q99758 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
ABCA3Q99758 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ABCA3Q99758 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC24.3■■□□□ 1.48
ABCA3Q99758 LINC01006-201ENST00000333319 2292 ntBASIC24.3■■□□□ 1.48
ABCA3Q99758 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
ABCA3Q99758 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
ABCA3Q99758 AC112698.1-201ENST00000510299 916 ntBASIC24.3■■□□□ 1.48
ABCA3Q99758 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ABCA3Q99758 AC018845.2-201ENST00000568326 409 ntBASIC24.3■■□□□ 1.48
ABCA3Q99758 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
ABCA3Q99758 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC24.3■■□□□ 1.48
ABCA3Q99758 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
ABCA3Q99758 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ABCA3Q99758 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
ABCA3Q99758 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
ABCA3Q99758 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ABCA3Q99758 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC24.3■■□□□ 1.48
ABCA3Q99758 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC24.3■■□□□ 1.48
ABCA3Q99758 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
ABCA3Q99758 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC24.3■■□□□ 1.48
ABCA3Q99758 AL078644.1-201ENST00000609881 752 ntBASIC24.3■■□□□ 1.48
ABCA3Q99758 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC24.29■■□□□ 1.48
ABCA3Q99758 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ABCA3Q99758 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
ABCA3Q99758 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC24.29■■□□□ 1.48
ABCA3Q99758 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC24.29■■□□□ 1.48
ABCA3Q99758 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ABCA3Q99758 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC24.29■■□□□ 1.48
ABCA3Q99758 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
ABCA3Q99758 KRT18P28-201ENST00000453838 1332 ntBASIC24.29■■□□□ 1.48
ABCA3Q99758 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC24.29■■□□□ 1.48
ABCA3Q99758 POLI-202ENST00000406285 2030 ntTSL 2 BASIC24.29■■□□□ 1.48
ABCA3Q99758 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ABCA3Q99758 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC24.29■■□□□ 1.48
ABCA3Q99758 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ABCA3Q99758 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.29■■□□□ 1.48
ABCA3Q99758 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ABCA3Q99758 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC24.28■■□□□ 1.48
ABCA3Q99758 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
ABCA3Q99758 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ABCA3Q99758 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ABCA3Q99758 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC24.28■■□□□ 1.48
ABCA3Q99758 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ABCA3Q99758 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC24.28■■□□□ 1.48
ABCA3Q99758 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
ABCA3Q99758 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC24.28■■□□□ 1.48
ABCA3Q99758 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC24.28■■□□□ 1.48
ABCA3Q99758 PUS1-205ENST00000535067 838 ntTSL 3 BASIC24.28■■□□□ 1.48
ABCA3Q99758 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC24.28■■□□□ 1.48
ABCA3Q99758 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
ABCA3Q99758 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ABCA3Q99758 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
ABCA3Q99758 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ABCA3Q99758 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ABCA3Q99758 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC24.28■■□□□ 1.48
ABCA3Q99758 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ABCA3Q99758 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC24.27■■□□□ 1.48
ABCA3Q99758 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ABCA3Q99758 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
ABCA3Q99758 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
ABCA3Q99758 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ABCA3Q99758 SOD2-201ENST00000337404 991 ntTSL 2 BASIC24.27■■□□□ 1.48
ABCA3Q99758 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC24.27■■□□□ 1.48
ABCA3Q99758 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC24.27■■□□□ 1.48
ABCA3Q99758 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC24.27■■□□□ 1.48
ABCA3Q99758 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC24.27■■□□□ 1.48
ABCA3Q99758 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC24.27■■□□□ 1.48
ABCA3Q99758 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
ABCA3Q99758 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ABCA3Q99758 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC24.27■■□□□ 1.48
ABCA3Q99758 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ABCA3Q99758 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
ABCA3Q99758 ADK-206ENST00000541550 2222 ntTSL 2 BASIC24.27■■□□□ 1.48
ABCA3Q99758 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC24.27■■□□□ 1.48
ABCA3Q99758 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
ABCA3Q99758 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ABCA3Q99758 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC24.27■■□□□ 1.48
ABCA3Q99758 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
ABCA3Q99758 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC24.27■■□□□ 1.48
ABCA3Q99758 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC24.27■■□□□ 1.48
ABCA3Q99758 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
ABCA3Q99758 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC24.27■■□□□ 1.48
ABCA3Q99758 AP000867.4-201ENST00000641616 219 ntBASIC24.27■■□□□ 1.48
ABCA3Q99758 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ABCA3Q99758 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC24.26■■□□□ 1.47
ABCA3Q99758 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
ABCA3Q99758 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC24.26■■□□□ 1.47
ABCA3Q99758 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
ABCA3Q99758 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ABCA3Q99758 AC099343.3-201ENST00000605834 2503 ntBASIC24.26■■□□□ 1.47
ABCA3Q99758 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC24.26■■□□□ 1.47
ABCA3Q99758 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC24.26■■□□□ 1.47
ABCA3Q99758 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
ABCA3Q99758 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ABCA3Q99758 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ABCA3Q99758 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC24.26■■□□□ 1.47
ABCA3Q99758 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms