Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS2Q99743 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS2Q99743 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.97■□□□□ 0.47
NPAS2Q99743 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.97■□□□□ 0.47
NPAS2Q99743 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS2Q99743 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.97■□□□□ 0.47
NPAS2Q99743 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
NPAS2Q99743 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.97■□□□□ 0.47
NPAS2Q99743 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.97■□□□□ 0.47
NPAS2Q99743 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.97■□□□□ 0.47
NPAS2Q99743 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.97■□□□□ 0.47
NPAS2Q99743 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.97■□□□□ 0.47
NPAS2Q99743 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS2Q99743 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
NPAS2Q99743 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NPAS2Q99743 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS2Q99743 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS2Q99743 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.97■□□□□ 0.47
NPAS2Q99743 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.97■□□□□ 0.47
NPAS2Q99743 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS2Q99743 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS2Q99743 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS2Q99743 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.97■□□□□ 0.47
NPAS2Q99743 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS2Q99743 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
NPAS2Q99743 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS2Q99743 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.96■□□□□ 0.47
NPAS2Q99743 FSCN1P1-201ENST00000568912 1481 ntBASIC17.96■□□□□ 0.47
NPAS2Q99743 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS2Q99743 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS2Q99743 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.96■□□□□ 0.47
NPAS2Q99743 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS2Q99743 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
NPAS2Q99743 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS2Q99743 FAM210CP-201ENST00000445714 574 ntBASIC17.96■□□□□ 0.47
NPAS2Q99743 AC008040.2-201ENST00000461049 708 ntBASIC17.96■□□□□ 0.47
NPAS2Q99743 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.96■□□□□ 0.47
NPAS2Q99743 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.96■□□□□ 0.47
NPAS2Q99743 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.96■□□□□ 0.47
NPAS2Q99743 AC131212.4-201ENST00000623606 975 ntBASIC17.96■□□□□ 0.47
NPAS2Q99743 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.96■□□□□ 0.47
NPAS2Q99743 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
NPAS2Q99743 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
NPAS2Q99743 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS2Q99743 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.96■□□□□ 0.47
NPAS2Q99743 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS2Q99743 GNAS-203ENST00000306120 1878 ntBASIC17.96■□□□□ 0.47
NPAS2Q99743 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NPAS2Q99743 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS2Q99743 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS2Q99743 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS2Q99743 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
NPAS2Q99743 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS2Q99743 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
NPAS2Q99743 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.95■□□□□ 0.46
NPAS2Q99743 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS2Q99743 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS2Q99743 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS2Q99743 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.95■□□□□ 0.46
NPAS2Q99743 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS2Q99743 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.95■□□□□ 0.46
NPAS2Q99743 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.95■□□□□ 0.46
NPAS2Q99743 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS2Q99743 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS2Q99743 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS2Q99743 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.95■□□□□ 0.46
NPAS2Q99743 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
NPAS2Q99743 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS2Q99743 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS2Q99743 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS2Q99743 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS2Q99743 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS2Q99743 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS2Q99743 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
NPAS2Q99743 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.95■□□□□ 0.46
NPAS2Q99743 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.95■□□□□ 0.46
NPAS2Q99743 AL160286.2-201ENST00000567150 934 ntBASIC17.95■□□□□ 0.46
NPAS2Q99743 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS2Q99743 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.95■□□□□ 0.46
NPAS2Q99743 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
NPAS2Q99743 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.95■□□□□ 0.46
NPAS2Q99743 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS2Q99743 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.95■□□□□ 0.46
NPAS2Q99743 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS2Q99743 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS2Q99743 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS2Q99743 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS2Q99743 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.95■□□□□ 0.46
NPAS2Q99743 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS2Q99743 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS2Q99743 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.95■□□□□ 0.46
NPAS2Q99743 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NPAS2Q99743 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS2Q99743 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS2Q99743 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.94■□□□□ 0.46
NPAS2Q99743 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS2Q99743 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.94■□□□□ 0.46
NPAS2Q99743 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS2Q99743 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS2Q99743 BCL2-203ENST00000589955 5011 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms