Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 AL139400.1-201ENST00000366220 510 ntBASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 AC092910.1-201ENST00000482027 1129 ntBASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 AP003733.1-201ENST00000491725 852 ntBASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 AC092474.2-201ENST00000424288 719 ntBASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 MIR4745-201ENST00000577608 62 ntBASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD1Q96PZ7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 INTS4P1-201ENST00000438455 1935 ntBASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 GK-202ENST00000378941 458 ntTSL 3 BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 KRT18P2-201ENST00000447938 1258 ntBASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC15.55■□□□□ 0.08
CSMD1Q96PZ7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 HOXB1-202ENST00000577092 1414 ntBASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms