Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.72■■□□□ 1.07
NEK1Q96PY6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NEK1Q96PY6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.72■■□□□ 1.07
NEK1Q96PY6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NEK1Q96PY6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NEK1Q96PY6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.72■■□□□ 1.07
NEK1Q96PY6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NEK1Q96PY6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NEK1Q96PY6 AC113347.1-201ENST00000413321 391 ntBASIC21.72■■□□□ 1.07
NEK1Q96PY6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.72■■□□□ 1.07
NEK1Q96PY6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.72■■□□□ 1.07
NEK1Q96PY6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NEK1Q96PY6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NEK1Q96PY6 LINC01126-201ENST00000623515 1646 ntBASIC21.72■■□□□ 1.07
NEK1Q96PY6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NEK1Q96PY6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.72■■□□□ 1.07
NEK1Q96PY6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
NEK1Q96PY6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
NEK1Q96PY6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.71■■□□□ 1.07
NEK1Q96PY6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
NEK1Q96PY6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NEK1Q96PY6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NEK1Q96PY6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.71■■□□□ 1.07
NEK1Q96PY6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NEK1Q96PY6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.71■■□□□ 1.07
NEK1Q96PY6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
NEK1Q96PY6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
NEK1Q96PY6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.71■■□□□ 1.07
NEK1Q96PY6 ATP5G1P1-201ENST00000448724 379 ntBASIC21.71■■□□□ 1.07
NEK1Q96PY6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.71■■□□□ 1.07
NEK1Q96PY6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
NEK1Q96PY6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.71■■□□□ 1.07
NEK1Q96PY6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.71■■□□□ 1.07
NEK1Q96PY6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.71■■□□□ 1.07
NEK1Q96PY6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NEK1Q96PY6 REXO1L9P-201ENST00000604264 2108 ntBASIC21.71■■□□□ 1.07
NEK1Q96PY6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NEK1Q96PY6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
NEK1Q96PY6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.71■■□□□ 1.07
NEK1Q96PY6 AC018470.1-201ENST00000624790 3129 ntBASIC21.71■■□□□ 1.07
NEK1Q96PY6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
NEK1Q96PY6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.07
NEK1Q96PY6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NEK1Q96PY6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.7■■□□□ 1.06
NEK1Q96PY6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
NEK1Q96PY6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NEK1Q96PY6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NEK1Q96PY6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NEK1Q96PY6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NEK1Q96PY6 TERF1P1-201ENST00000311003 1181 ntBASIC21.7■■□□□ 1.06
NEK1Q96PY6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
NEK1Q96PY6 AL137013.1-201ENST00000432946 1228 ntBASIC21.7■■□□□ 1.06
NEK1Q96PY6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.7■■□□□ 1.06
NEK1Q96PY6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
NEK1Q96PY6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.7■■□□□ 1.06
NEK1Q96PY6 GCSHP2-201ENST00000560971 527 ntBASIC21.7■■□□□ 1.06
NEK1Q96PY6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
NEK1Q96PY6 AL023973.1-201ENST00000624619 620 ntBASIC21.7■■□□□ 1.06
NEK1Q96PY6 AC092865.7-201ENST00000641832 219 ntBASIC21.7■■□□□ 1.06
NEK1Q96PY6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NEK1Q96PY6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
NEK1Q96PY6 AL096828.2-201ENST00000567259 1965 ntBASIC21.7■■□□□ 1.06
NEK1Q96PY6 AC073508.3-201ENST00000619697 1419 ntBASIC21.7■■□□□ 1.06
NEK1Q96PY6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NEK1Q96PY6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.7■■□□□ 1.06
NEK1Q96PY6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NEK1Q96PY6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NEK1Q96PY6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
NEK1Q96PY6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
NEK1Q96PY6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NEK1Q96PY6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NEK1Q96PY6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NEK1Q96PY6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.69■■□□□ 1.06
NEK1Q96PY6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NEK1Q96PY6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
NEK1Q96PY6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NEK1Q96PY6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NEK1Q96PY6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NEK1Q96PY6 AL024508.2-201ENST00000607749 1894 ntBASIC21.69■■□□□ 1.06
NEK1Q96PY6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NEK1Q96PY6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NEK1Q96PY6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.69■■□□□ 1.06
NEK1Q96PY6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NEK1Q96PY6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.69■■□□□ 1.06
NEK1Q96PY6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.69■■□□□ 1.06
NEK1Q96PY6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NEK1Q96PY6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.69■■□□□ 1.06
NEK1Q96PY6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.69■■□□□ 1.06
NEK1Q96PY6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.69■■□□□ 1.06
NEK1Q96PY6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.69■■□□□ 1.06
NEK1Q96PY6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
NEK1Q96PY6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
NEK1Q96PY6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.69■■□□□ 1.06
NEK1Q96PY6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NEK1Q96PY6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.69■■□□□ 1.06
NEK1Q96PY6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.69■■□□□ 1.06
NEK1Q96PY6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
NEK1Q96PY6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
NEK1Q96PY6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NEK1Q96PY6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms