Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 AL139384.1-201ENST00000612143 3047 ntBASIC15.79■□□□□ 0.12
CMTM3Q96MX0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 KRT18P5-201ENST00000436075 1291 ntBASIC15.79■□□□□ 0.12
CMTM3Q96MX0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 AC105036.2-201ENST00000569468 176 ntBASIC15.79■□□□□ 0.12
CMTM3Q96MX0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMTM3Q96MX0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 MIR935-201ENST00000401179 91 ntBASIC15.78■□□□□ 0.12
CMTM3Q96MX0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.78■□□□□ 0.12
CMTM3Q96MX0 AC091874.3-201ENST00000512672 1195 ntBASIC15.78■□□□□ 0.12
CMTM3Q96MX0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMTM3Q96MX0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.77■□□□□ 0.12
CMTM3Q96MX0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.77■□□□□ 0.12
CMTM3Q96MX0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.77■□□□□ 0.12
CMTM3Q96MX0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.77■□□□□ 0.12
CMTM3Q96MX0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CMTM3Q96MX0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CMTM3Q96MX0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CMTM3Q96MX0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CMTM3Q96MX0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CMTM3Q96MX0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.77■□□□□ 0.12
CMTM3Q96MX0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.77■□□□□ 0.12
CMTM3Q96MX0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CMTM3Q96MX0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.77■□□□□ 0.12
CMTM3Q96MX0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.77■□□□□ 0.12
CMTM3Q96MX0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.77■□□□□ 0.12
CMTM3Q96MX0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC15.77■□□□□ 0.12
CMTM3Q96MX0 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.77■□□□□ 0.12
CMTM3Q96MX0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.77■□□□□ 0.12
CMTM3Q96MX0 PNMA6B-201ENST00000538162 1200 ntBASIC15.77■□□□□ 0.12
CMTM3Q96MX0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.77■□□□□ 0.12
CMTM3Q96MX0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CMTM3Q96MX0 AC004264.1-201ENST00000608354 794 ntBASIC15.77■□□□□ 0.12
CMTM3Q96MX0 AC092118.2-201ENST00000613495 667 ntBASIC15.77■□□□□ 0.12
CMTM3Q96MX0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CMTM3Q96MX0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CMTM3Q96MX0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CMTM3Q96MX0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CMTM3Q96MX0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms