Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 AC141257.4-201ENST00000634557 245 ntBASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 AC136944.6-201ENST00000634818 245 ntBASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 AC099343.3-201ENST00000605834 2503 ntBASIC17.92■□□□□ 0.46
PDLIM5Q96HC4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.91■□□□□ 0.46
PDLIM5Q96HC4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM5Q96HC4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM5Q96HC4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM5Q96HC4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.91■□□□□ 0.46
PDLIM5Q96HC4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.91■□□□□ 0.46
PDLIM5Q96HC4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM5Q96HC4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM5Q96HC4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM5Q96HC4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM5Q96HC4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.91■□□□□ 0.46
PDLIM5Q96HC4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM5Q96HC4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM5Q96HC4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM5Q96HC4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.91■□□□□ 0.46
PDLIM5Q96HC4 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.91■□□□□ 0.46
PDLIM5Q96HC4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM5Q96HC4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.91■□□□□ 0.46
PDLIM5Q96HC4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PDLIM5Q96HC4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM5Q96HC4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PDLIM5Q96HC4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM5Q96HC4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 AC008687.5-201ENST00000593746 558 ntBASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 AC012306.2-201ENST00000609350 630 ntBASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM5Q96HC4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
PDLIM5Q96HC4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 AL133373.2-201ENST00000623187 2828 ntBASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 PVRIG2P-201ENST00000435460 978 ntBASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms