Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RPGRQ92834 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RPGRQ92834 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
RPGRQ92834 RPS2P28-201ENST00000314255 741 ntBASIC22.56■■□□□ 1.2
RPGRQ92834 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
RPGRQ92834 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RPGRQ92834 MIR1233-2-201ENST00000408138 82 ntBASIC22.56■■□□□ 1.2
RPGRQ92834 MIR1233-1-201ENST00000408722 82 ntBASIC22.56■■□□□ 1.2
RPGRQ92834 HNRNPDP1-201ENST00000439535 754 ntBASIC22.56■■□□□ 1.2
RPGRQ92834 MEG3-211ENST00000452514 461 ntTSL 3 BASIC22.56■■□□□ 1.2
RPGRQ92834 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC22.56■■□□□ 1.2
RPGRQ92834 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RPGRQ92834 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC22.56■■□□□ 1.2
RPGRQ92834 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.56■■□□□ 1.2
RPGRQ92834 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC22.56■■□□□ 1.2
RPGRQ92834 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RPGRQ92834 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC22.56■■□□□ 1.2
RPGRQ92834 AC009154.2-201ENST00000621177 724 ntBASIC22.56■■□□□ 1.2
RPGRQ92834 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RPGRQ92834 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RPGRQ92834 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RPGRQ92834 AL024508.2-201ENST00000607749 1894 ntBASIC22.56■■□□□ 1.2
RPGRQ92834 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
RPGRQ92834 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RPGRQ92834 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RPGRQ92834 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC22.55■■□□□ 1.2
RPGRQ92834 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.55■■□□□ 1.2
RPGRQ92834 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RPGRQ92834 DANCR-204ENST00000444958 709 ntTSL 3 BASIC22.55■■□□□ 1.2
RPGRQ92834 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC22.55■■□□□ 1.2
RPGRQ92834 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC22.55■■□□□ 1.2
RPGRQ92834 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC22.55■■□□□ 1.2
RPGRQ92834 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RPGRQ92834 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RPGRQ92834 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC22.55■■□□□ 1.2
RPGRQ92834 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RPGRQ92834 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC22.55■■□□□ 1.2
RPGRQ92834 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RPGRQ92834 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RPGRQ92834 SDHAP2-201ENST00000455183 2001 ntBASIC22.55■■□□□ 1.2
RPGRQ92834 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RPGRQ92834 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPGRQ92834 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RPGRQ92834 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RPGRQ92834 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPGRQ92834 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPGRQ92834 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.54■■□□□ 1.2
RPGRQ92834 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC22.54■■□□□ 1.2
RPGRQ92834 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
RPGRQ92834 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RPGRQ92834 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPGRQ92834 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
RPGRQ92834 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC22.54■■□□□ 1.2
RPGRQ92834 MTCL1P1-201ENST00000446207 792 ntBASIC22.54■■□□□ 1.2
RPGRQ92834 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC22.54■■□□□ 1.2
RPGRQ92834 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RPGRQ92834 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC22.54■■□□□ 1.2
RPGRQ92834 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC22.54■■□□□ 1.2
RPGRQ92834 PIN1-206ENST00000587625 878 ntTSL 2 BASIC22.54■■□□□ 1.2
RPGRQ92834 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC22.54■■□□□ 1.2
RPGRQ92834 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RPGRQ92834 AC116407.3-201ENST00000623905 1129 ntBASIC22.54■■□□□ 1.2
RPGRQ92834 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.54■■□□□ 1.2
RPGRQ92834 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.54■■□□□ 1.2
RPGRQ92834 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPGRQ92834 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPGRQ92834 MYLKP1-201ENST00000509077 1580 ntBASIC22.54■■□□□ 1.2
RPGRQ92834 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC22.54■■□□□ 1.2
RPGRQ92834 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPGRQ92834 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.54■■□□□ 1.2
RPGRQ92834 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RPGRQ92834 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
RPGRQ92834 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.53■■□□□ 1.2
RPGRQ92834 INTS4P1-201ENST00000438455 1935 ntBASIC22.53■■□□□ 1.2
RPGRQ92834 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
RPGRQ92834 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.53■■□□□ 1.2
RPGRQ92834 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RPGRQ92834 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RPGRQ92834 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
RPGRQ92834 FABP5-202ENST00000396359 986 ntTSL 5 BASIC22.53■■□□□ 1.2
RPGRQ92834 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC22.53■■□□□ 1.2
RPGRQ92834 AL138831.2-201ENST00000606564 490 ntBASIC22.53■■□□□ 1.2
RPGRQ92834 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC22.53■■□□□ 1.2
RPGRQ92834 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RPGRQ92834 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC22.53■■□□□ 1.2
RPGRQ92834 AL161938.1-201ENST00000569833 2180 ntBASIC22.53■■□□□ 1.2
RPGRQ92834 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RPGRQ92834 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RPGRQ92834 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RPGRQ92834 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RPGRQ92834 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RPGRQ92834 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC22.53■■□□□ 1.2
RPGRQ92834 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RPGRQ92834 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RPGRQ92834 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RPGRQ92834 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RPGRQ92834 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RPGRQ92834 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RPGRQ92834 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC22.52■■□□□ 1.2
RPGRQ92834 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms