Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF139Q8WU17 HBZP1-201ENST00000354915 429 ntBASIC19.26■□□□□ 0.67
RNF139Q8WU17 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RNF139Q8WU17 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF139Q8WU17 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF139Q8WU17 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RNF139Q8WU17 AL136038.4-201ENST00000603606 1261 ntBASIC19.26■□□□□ 0.67
RNF139Q8WU17 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF139Q8WU17 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF139Q8WU17 HYMAI.1-201ENST00000620949 238 ntBASIC19.26■□□□□ 0.67
RNF139Q8WU17 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RNF139Q8WU17 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
RNF139Q8WU17 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF139Q8WU17 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF139Q8WU17 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF139Q8WU17 AC104581.1-202ENST00000635932 2618 ntBASIC19.26■□□□□ 0.67
RNF139Q8WU17 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF139Q8WU17 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RNF139Q8WU17 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF139Q8WU17 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF139Q8WU17 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF139Q8WU17 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF139Q8WU17 AC090340.1-201ENST00000620778 4980 ntBASIC19.26■□□□□ 0.67
RNF139Q8WU17 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF139Q8WU17 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF139Q8WU17 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF139Q8WU17 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF139Q8WU17 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RNF139Q8WU17 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF139Q8WU17 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RNF139Q8WU17 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF139Q8WU17 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RNF139Q8WU17 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RNF139Q8WU17 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF139Q8WU17 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF139Q8WU17 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF139Q8WU17 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF139Q8WU17 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF139Q8WU17 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF139Q8WU17 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF139Q8WU17 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.25■□□□□ 0.67
RNF139Q8WU17 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.25■□□□□ 0.67
RNF139Q8WU17 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF139Q8WU17 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF139Q8WU17 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF139Q8WU17 AC079602.3-201ENST00000623931 403 ntBASIC19.25■□□□□ 0.67
RNF139Q8WU17 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF139Q8WU17 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF139Q8WU17 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF139Q8WU17 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF139Q8WU17 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
RNF139Q8WU17 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.25■□□□□ 0.67
RNF139Q8WU17 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF139Q8WU17 AL391807.1-203ENST00000604392 2365 ntBASIC19.25■□□□□ 0.67
RNF139Q8WU17 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
RNF139Q8WU17 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF139Q8WU17 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF139Q8WU17 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF139Q8WU17 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF139Q8WU17 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF139Q8WU17 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF139Q8WU17 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RNF139Q8WU17 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF139Q8WU17 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF139Q8WU17 AC009113.1-201ENST00000570267 2443 ntBASIC19.24■□□□□ 0.67
RNF139Q8WU17 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF139Q8WU17 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF139Q8WU17 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF139Q8WU17 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF139Q8WU17 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RNF139Q8WU17 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF139Q8WU17 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.24■□□□□ 0.67
RNF139Q8WU17 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF139Q8WU17 PVRIG2P-201ENST00000435460 978 ntBASIC19.24■□□□□ 0.67
RNF139Q8WU17 VENTXP5-201ENST00000523979 775 ntBASIC19.24■□□□□ 0.67
RNF139Q8WU17 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF139Q8WU17 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF139Q8WU17 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF139Q8WU17 AC083849.1-201ENST00000615227 514 ntBASIC19.24■□□□□ 0.67
RNF139Q8WU17 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.24■□□□□ 0.67
RNF139Q8WU17 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF139Q8WU17 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF139Q8WU17 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF139Q8WU17 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF139Q8WU17 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RNF139Q8WU17 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF139Q8WU17 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF139Q8WU17 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
RNF139Q8WU17 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF139Q8WU17 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF139Q8WU17 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF139Q8WU17 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF139Q8WU17 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF139Q8WU17 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF139Q8WU17 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RNF139Q8WU17 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF139Q8WU17 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF139Q8WU17 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF139Q8WU17 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF139Q8WU17 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms