Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AC068587.9-201ENST00000641814 219 ntBASIC16.42■□□□□ 0.22
CHD6Q8TD26 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD6Q8TD26 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD6Q8TD26 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.42■□□□□ 0.22
CHD6Q8TD26 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHD6Q8TD26 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CHD6Q8TD26 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.42■□□□□ 0.22
CHD6Q8TD26 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CHD6Q8TD26 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHD6Q8TD26 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
CHD6Q8TD26 PRYP5-201ENST00000451909 266 ntBASIC16.42■□□□□ 0.22
CHD6Q8TD26 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.42■□□□□ 0.22
CHD6Q8TD26 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.42■□□□□ 0.22
CHD6Q8TD26 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.42■□□□□ 0.22
CHD6Q8TD26 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.42■□□□□ 0.22
CHD6Q8TD26 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHD6Q8TD26 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.42■□□□□ 0.22
CHD6Q8TD26 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD6Q8TD26 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.41■□□□□ 0.22
CHD6Q8TD26 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHD6Q8TD26 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHD6Q8TD26 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.41■□□□□ 0.22
CHD6Q8TD26 MIR4751-201ENST00000578027 74 ntBASIC16.41■□□□□ 0.22
CHD6Q8TD26 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CHD6Q8TD26 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CHD6Q8TD26 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.41■□□□□ 0.22
CHD6Q8TD26 AC009237.14-201ENST00000609975 1594 ntBASIC16.41■□□□□ 0.22
CHD6Q8TD26 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CHD6Q8TD26 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CHD6Q8TD26 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHD6Q8TD26 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHD6Q8TD26 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CHD6Q8TD26 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
CHD6Q8TD26 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.41■□□□□ 0.22
CHD6Q8TD26 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHD6Q8TD26 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.41■□□□□ 0.22
CHD6Q8TD26 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.41■□□□□ 0.22
CHD6Q8TD26 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.41■□□□□ 0.22
CHD6Q8TD26 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.41■□□□□ 0.22
CHD6Q8TD26 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.41■□□□□ 0.22
CHD6Q8TD26 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHD6Q8TD26 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.41■□□□□ 0.22
CHD6Q8TD26 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.41■□□□□ 0.22
CHD6Q8TD26 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.41■□□□□ 0.22
CHD6Q8TD26 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHD6Q8TD26 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHD6Q8TD26 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHD6Q8TD26 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHD6Q8TD26 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CHD6Q8TD26 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHD6Q8TD26 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHD6Q8TD26 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHD6Q8TD26 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHD6Q8TD26 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CHD6Q8TD26 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHD6Q8TD26 RHOQP3-201ENST00000437982 621 ntBASIC16.4■□□□□ 0.22
CHD6Q8TD26 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.4■□□□□ 0.22
CHD6Q8TD26 RNA5SP423-201ENST00000517127 109 ntBASIC16.4■□□□□ 0.22
CHD6Q8TD26 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.4■□□□□ 0.22
CHD6Q8TD26 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHD6Q8TD26 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.4■□□□□ 0.22
CHD6Q8TD26 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHD6Q8TD26 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.4■□□□□ 0.22
CHD6Q8TD26 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.4■□□□□ 0.22
CHD6Q8TD26 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHD6Q8TD26 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.4■□□□□ 0.22
CHD6Q8TD26 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.4■□□□□ 0.22
CHD6Q8TD26 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CHD6Q8TD26 PMPCAP1-201ENST00000508114 1576 ntBASIC16.4■□□□□ 0.22
CHD6Q8TD26 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CHD6Q8TD26 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHD6Q8TD26 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.4■□□□□ 0.22
CHD6Q8TD26 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.4■□□□□ 0.22
CHD6Q8TD26 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.4■□□□□ 0.22
CHD6Q8TD26 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHD6Q8TD26 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHD6Q8TD26 AC099343.3-201ENST00000605834 2503 ntBASIC16.4■□□□□ 0.22
CHD6Q8TD26 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHD6Q8TD26 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHD6Q8TD26 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
CHD6Q8TD26 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CHD6Q8TD26 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.39■□□□□ 0.22
CHD6Q8TD26 SPTLC1P1-201ENST00000447199 261 ntBASIC16.39■□□□□ 0.22
CHD6Q8TD26 GIMAP3P-201ENST00000495150 836 ntBASIC16.39■□□□□ 0.22
CHD6Q8TD26 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.39■□□□□ 0.22
CHD6Q8TD26 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHD6Q8TD26 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.39■□□□□ 0.21
CHD6Q8TD26 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHD6Q8TD26 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHD6Q8TD26 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.39■□□□□ 0.21
CHD6Q8TD26 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CHD6Q8TD26 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.39■□□□□ 0.21
CHD6Q8TD26 AC106886.1-201ENST00000568660 600 ntBASIC16.39■□□□□ 0.21
CHD6Q8TD26 AC010654.1-201ENST00000615722 808 ntBASIC16.39■□□□□ 0.21
CHD6Q8TD26 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CHD6Q8TD26 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHD6Q8TD26 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHD6Q8TD26 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHD6Q8TD26 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHD6Q8TD26 AC092506.1-202ENST00000401022 528 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms