Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
SIMC1Q8NDZ2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 PRORSD1P-202ENST00000563365 2154 ntBASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 TERF1P1-201ENST00000311003 1181 ntBASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 AC112777.1-201ENST00000540175 1423 ntBASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 AC073508.3-201ENST00000619697 1419 ntBASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SIMC1Q8NDZ2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 AC005521.1-201ENST00000393351 872 ntBASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 KRT18P57-201ENST00000443599 1254 ntBASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 AC024243.1-201ENST00000609234 778 ntBASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 AC005363.2-201ENST00000618631 242 ntBASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 AC141257.4-201ENST00000634557 245 ntBASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 AC136944.6-201ENST00000634818 245 ntBASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.27■□□□□ 0.36
SIMC1Q8NDZ2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SIMC1Q8NDZ2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SIMC1Q8NDZ2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.27■□□□□ 0.35
SIMC1Q8NDZ2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SIMC1Q8NDZ2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.35
SIMC1Q8NDZ2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.27■□□□□ 0.35
SIMC1Q8NDZ2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SIMC1Q8NDZ2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SIMC1Q8NDZ2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SIMC1Q8NDZ2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SIMC1Q8NDZ2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIMC1Q8NDZ2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms