Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CFAP43Q8NDM7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC28.6■■■□□ 2.17
CFAP43Q8NDM7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CFAP43Q8NDM7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
CFAP43Q8NDM7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
CFAP43Q8NDM7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CFAP43Q8NDM7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC28.59■■■□□ 2.17
CFAP43Q8NDM7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
CFAP43Q8NDM7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC28.59■■■□□ 2.17
CFAP43Q8NDM7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC28.59■■■□□ 2.17
CFAP43Q8NDM7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
CFAP43Q8NDM7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
CFAP43Q8NDM7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
CFAP43Q8NDM7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CFAP43Q8NDM7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CFAP43Q8NDM7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
CFAP43Q8NDM7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CFAP43Q8NDM7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC28.58■■■□□ 2.17
CFAP43Q8NDM7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC28.58■■■□□ 2.17
CFAP43Q8NDM7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC28.58■■■□□ 2.17
CFAP43Q8NDM7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC28.58■■■□□ 2.17
CFAP43Q8NDM7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CFAP43Q8NDM7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC28.58■■■□□ 2.17
CFAP43Q8NDM7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CFAP43Q8NDM7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC28.58■■■□□ 2.17
CFAP43Q8NDM7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CFAP43Q8NDM7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
CFAP43Q8NDM7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC28.58■■■□□ 2.17
CFAP43Q8NDM7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CFAP43Q8NDM7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CFAP43Q8NDM7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CFAP43Q8NDM7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC28.58■■■□□ 2.17
CFAP43Q8NDM7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC28.58■■■□□ 2.16
CFAP43Q8NDM7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC28.58■■■□□ 2.16
CFAP43Q8NDM7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.16
CFAP43Q8NDM7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CFAP43Q8NDM7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CFAP43Q8NDM7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC28.57■■■□□ 2.16
CFAP43Q8NDM7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CFAP43Q8NDM7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC28.57■■■□□ 2.16
CFAP43Q8NDM7 AP001269.4-201ENST00000609611 512 ntBASIC28.57■■■□□ 2.16
CFAP43Q8NDM7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
CFAP43Q8NDM7 SDHAP2-201ENST00000455183 2001 ntBASIC28.56■■■□□ 2.16
CFAP43Q8NDM7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
CFAP43Q8NDM7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
CFAP43Q8NDM7 AC104109.2-201ENST00000602919 1418 ntBASIC28.56■■■□□ 2.16
CFAP43Q8NDM7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CFAP43Q8NDM7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
CFAP43Q8NDM7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
CFAP43Q8NDM7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC28.56■■■□□ 2.16
CFAP43Q8NDM7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC28.56■■■□□ 2.16
CFAP43Q8NDM7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CFAP43Q8NDM7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
CFAP43Q8NDM7 PAN3-AS1-201ENST00000563843 1351 ntBASIC28.56■■■□□ 2.16
CFAP43Q8NDM7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
CFAP43Q8NDM7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
CFAP43Q8NDM7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC28.56■■■□□ 2.16
CFAP43Q8NDM7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CFAP43Q8NDM7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC28.55■■■□□ 2.16
CFAP43Q8NDM7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC28.55■■■□□ 2.16
CFAP43Q8NDM7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC28.55■■■□□ 2.16
CFAP43Q8NDM7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CFAP43Q8NDM7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC28.55■■■□□ 2.16
CFAP43Q8NDM7 MIR5100-201ENST00000579544 119 ntBASIC28.55■■■□□ 2.16
CFAP43Q8NDM7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC28.55■■■□□ 2.16
CFAP43Q8NDM7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
CFAP43Q8NDM7 Z83851.2-201ENST00000609564 659 ntBASIC28.55■■■□□ 2.16
CFAP43Q8NDM7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
CFAP43Q8NDM7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CFAP43Q8NDM7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
CFAP43Q8NDM7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC28.55■■■□□ 2.16
CFAP43Q8NDM7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC28.55■■■□□ 2.16
CFAP43Q8NDM7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CFAP43Q8NDM7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC28.55■■■□□ 2.16
CFAP43Q8NDM7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CFAP43Q8NDM7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CFAP43Q8NDM7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CFAP43Q8NDM7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CFAP43Q8NDM7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
CFAP43Q8NDM7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC28.54■■■□□ 2.16
CFAP43Q8NDM7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC28.54■■■□□ 2.16
CFAP43Q8NDM7 MYLKP1-201ENST00000509077 1580 ntBASIC28.54■■■□□ 2.16
CFAP43Q8NDM7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
CFAP43Q8NDM7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CFAP43Q8NDM7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC28.54■■■□□ 2.16
CFAP43Q8NDM7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
CFAP43Q8NDM7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC28.54■■■□□ 2.16
CFAP43Q8NDM7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC28.54■■■□□ 2.16
CFAP43Q8NDM7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC28.54■■■□□ 2.16
CFAP43Q8NDM7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC28.54■■■□□ 2.16
CFAP43Q8NDM7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC28.54■■■□□ 2.16
CFAP43Q8NDM7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC28.54■■■□□ 2.16
CFAP43Q8NDM7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC28.54■■■□□ 2.16
CFAP43Q8NDM7 AC040169.1-201ENST00000565382 521 ntBASIC28.54■■■□□ 2.16
CFAP43Q8NDM7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC28.54■■■□□ 2.16
CFAP43Q8NDM7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CFAP43Q8NDM7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC28.54■■■□□ 2.16
CFAP43Q8NDM7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
CFAP43Q8NDM7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CFAP43Q8NDM7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms