Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC27.37■■□□□ 1.97
AFAP1Q8N556 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC27.37■■□□□ 1.97
AFAP1Q8N556 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
AFAP1Q8N556 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
AFAP1Q8N556 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
AFAP1Q8N556 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
AFAP1Q8N556 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
AFAP1Q8N556 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
AFAP1Q8N556 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
AFAP1Q8N556 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC27.36■■□□□ 1.97
AFAP1Q8N556 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC27.36■■□□□ 1.97
AFAP1Q8N556 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
AFAP1Q8N556 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
AFAP1Q8N556 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
AFAP1Q8N556 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC27.36■■□□□ 1.97
AFAP1Q8N556 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC27.36■■□□□ 1.97
AFAP1Q8N556 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC27.36■■□□□ 1.97
AFAP1Q8N556 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
AFAP1Q8N556 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
AFAP1Q8N556 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
AFAP1Q8N556 ADK-206ENST00000541550 2222 ntTSL 2 BASIC27.36■■□□□ 1.97
AFAP1Q8N556 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
AFAP1Q8N556 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
AFAP1Q8N556 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
AFAP1Q8N556 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC27.35■■□□□ 1.97
AFAP1Q8N556 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC27.35■■□□□ 1.97
AFAP1Q8N556 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC27.35■■□□□ 1.97
AFAP1Q8N556 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC27.35■■□□□ 1.97
AFAP1Q8N556 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
AFAP1Q8N556 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC27.35■■□□□ 1.97
AFAP1Q8N556 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
AFAP1Q8N556 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
AFAP1Q8N556 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
AFAP1Q8N556 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
AFAP1Q8N556 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
AFAP1Q8N556 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
AFAP1Q8N556 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC27.35■■□□□ 1.97
AFAP1Q8N556 CRCP-205ENST00000431089 942 ntTSL 2 BASIC27.35■■□□□ 1.97
AFAP1Q8N556 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC27.35■■□□□ 1.97
AFAP1Q8N556 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC27.35■■□□□ 1.97
AFAP1Q8N556 RNF151-202ENST00000569210 853 ntTSL 2 BASIC27.35■■□□□ 1.97
AFAP1Q8N556 AC002347.1-201ENST00000569543 541 ntBASIC27.35■■□□□ 1.97
AFAP1Q8N556 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC27.35■■□□□ 1.97
AFAP1Q8N556 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
AFAP1Q8N556 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC27.35■■□□□ 1.97
AFAP1Q8N556 AP000867.4-201ENST00000641616 219 ntBASIC27.35■■□□□ 1.97
AFAP1Q8N556 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
AFAP1Q8N556 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
AFAP1Q8N556 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
AFAP1Q8N556 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
AFAP1Q8N556 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
AFAP1Q8N556 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
AFAP1Q8N556 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
AFAP1Q8N556 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
AFAP1Q8N556 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
AFAP1Q8N556 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
AFAP1Q8N556 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
AFAP1Q8N556 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
AFAP1Q8N556 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC27.34■■□□□ 1.97
AFAP1Q8N556 KIRREL3-AS3-201ENST00000404882 831 ntBASIC27.34■■□□□ 1.97
AFAP1Q8N556 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC27.34■■□□□ 1.97
AFAP1Q8N556 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC27.34■■□□□ 1.97
AFAP1Q8N556 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC27.34■■□□□ 1.97
AFAP1Q8N556 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC27.34■■□□□ 1.97
AFAP1Q8N556 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC27.34■■□□□ 1.97
AFAP1Q8N556 RPS15-207ENST00000591032 550 ntTSL 3 BASIC27.34■■□□□ 1.97
AFAP1Q8N556 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
AFAP1Q8N556 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
AFAP1Q8N556 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
AFAP1Q8N556 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC27.34■■□□□ 1.97
AFAP1Q8N556 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC27.33■■□□□ 1.97
AFAP1Q8N556 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
AFAP1Q8N556 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
AFAP1Q8N556 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
AFAP1Q8N556 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
AFAP1Q8N556 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
AFAP1Q8N556 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC27.33■■□□□ 1.97
AFAP1Q8N556 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
AFAP1Q8N556 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC27.33■■□□□ 1.97
AFAP1Q8N556 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC27.33■■□□□ 1.97
AFAP1Q8N556 RPS29-206ENST00000557111 488 ntTSL 2 BASIC27.33■■□□□ 1.97
AFAP1Q8N556 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
AFAP1Q8N556 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
AFAP1Q8N556 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
AFAP1Q8N556 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
AFAP1Q8N556 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
AFAP1Q8N556 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC27.32■■□□□ 1.96
AFAP1Q8N556 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC27.32■■□□□ 1.96
AFAP1Q8N556 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
AFAP1Q8N556 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
AFAP1Q8N556 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
AFAP1Q8N556 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC27.32■■□□□ 1.96
AFAP1Q8N556 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
AFAP1Q8N556 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC27.32■■□□□ 1.96
AFAP1Q8N556 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC27.32■■□□□ 1.96
AFAP1Q8N556 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC27.32■■□□□ 1.96
AFAP1Q8N556 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC27.32■■□□□ 1.96
AFAP1Q8N556 USP48-205ENST00000421625 2818 ntTSL 2 BASIC27.32■■□□□ 1.96
AFAP1Q8N556 ME2-218ENST00000640965 2476 ntTSL 5 BASIC27.32■■□□□ 1.96
AFAP1Q8N556 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms