Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 KRT18P13-201ENST00000400056 1290 ntBASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 AC114341.1-201ENST00000618070 349 ntBASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 AC139530.3-201ENST00000620344 690 ntBASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 TNXA-203ENST00000507684 2038 ntBASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNPOQ8N3V7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNPOQ8N3V7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNPOQ8N3V7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.6■□□□□ 0.57
SYNPOQ8N3V7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SYNPOQ8N3V7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNPOQ8N3V7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNPOQ8N3V7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNPOQ8N3V7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNPOQ8N3V7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNPOQ8N3V7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNPOQ8N3V7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.6■□□□□ 0.57
SYNPOQ8N3V7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.6■□□□□ 0.57
SYNPOQ8N3V7 RNPS1P1-201ENST00000507437 918 ntBASIC18.6■□□□□ 0.57
SYNPOQ8N3V7 AC113404.2-201ENST00000507884 177 ntBASIC18.6■□□□□ 0.57
SYNPOQ8N3V7 KRT18P58-201ENST00000527480 1120 ntBASIC18.6■□□□□ 0.57
SYNPOQ8N3V7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.6■□□□□ 0.57
SYNPOQ8N3V7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SYNPOQ8N3V7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.6■□□□□ 0.57
SYNPOQ8N3V7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.6■□□□□ 0.57
SYNPOQ8N3V7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SYNPOQ8N3V7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNPOQ8N3V7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SYNPOQ8N3V7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SYNPOQ8N3V7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 KRT8P50-201ENST00000562022 1438 ntBASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPOQ8N3V7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SYNPOQ8N3V7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
SYNPOQ8N3V7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SYNPOQ8N3V7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SYNPOQ8N3V7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SYNPOQ8N3V7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SYNPOQ8N3V7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SYNPOQ8N3V7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.58■□□□□ 0.57
SYNPOQ8N3V7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SYNPOQ8N3V7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SYNPOQ8N3V7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.58■□□□□ 0.56
SYNPOQ8N3V7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
SYNPOQ8N3V7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.58■□□□□ 0.56
SYNPOQ8N3V7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.58■□□□□ 0.56
SYNPOQ8N3V7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms