Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 FAAHP1-202ENST00000446499 1238 ntBASIC19.88■□□□□ 0.77
VPS52Q8N1B4 LINC00265-3P-201ENST00000447588 903 ntBASIC19.88■□□□□ 0.77
VPS52Q8N1B4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 FDX1P1-201ENST00000449115 551 ntBASIC19.88■□□□□ 0.77
VPS52Q8N1B4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
VPS52Q8N1B4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 Z83836.1-201ENST00000624605 1642 ntBASIC19.87■□□□□ 0.77
VPS52Q8N1B4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 MIR564-202ENST00000385049 94 ntBASIC19.87■□□□□ 0.77
VPS52Q8N1B4 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 IFNL4P1-201ENST00000607083 540 ntBASIC19.87■□□□□ 0.77
VPS52Q8N1B4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VPS52Q8N1B4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 KRT17P6-201ENST00000453795 1220 ntBASIC19.86■□□□□ 0.77
VPS52Q8N1B4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 AL732292.2-201ENST00000609649 430 ntBASIC19.86■□□□□ 0.77
VPS52Q8N1B4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
VPS52Q8N1B4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS52Q8N1B4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.85■□□□□ 0.77
VPS52Q8N1B4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS52Q8N1B4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
VPS52Q8N1B4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS52Q8N1B4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.85■□□□□ 0.77
VPS52Q8N1B4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.85■□□□□ 0.77
VPS52Q8N1B4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.85■□□□□ 0.77
VPS52Q8N1B4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
VPS52Q8N1B4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.85■□□□□ 0.77
VPS52Q8N1B4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.85■□□□□ 0.77
VPS52Q8N1B4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.85■□□□□ 0.77
VPS52Q8N1B4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms