Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 MIR574-201ENST00000385209 96 ntBASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 AC132008.2-207ENST00000454517 770 ntBASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 AF186996.4-201ENST00000467186 377 ntBASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 AC005336.2-201ENST00000593183 939 ntBASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 AC008687.5-201ENST00000593746 558 ntBASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 AC008608.2-201ENST00000606089 416 ntBASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 AC009102.3-201ENST00000623118 1491 ntBASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 AC083906.6-201ENST00000641366 219 ntBASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 AC099343.3-201ENST00000605834 2503 ntBASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS3Q8IXF0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 RCN1P2-201ENST00000398357 915 ntBASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS3Q8IXF0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 AC018712.1-201ENST00000455767 687 ntBASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms