Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.02■□□□□ 0.47
TRIM48Q8IWZ4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM48Q8IWZ4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
TRIM48Q8IWZ4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
TRIM48Q8IWZ4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM48Q8IWZ4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM48Q8IWZ4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 AP000593.1-201ENST00000393668 712 ntBASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 AC093458.2-201ENST00000623150 629 ntBASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM48Q8IWZ4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 AL391807.1-203ENST00000604392 2365 ntBASIC18■□□□□ 0.47
TRIM48Q8IWZ4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 AC116407.4-201ENST00000623319 1061 ntBASIC18■□□□□ 0.47
TRIM48Q8IWZ4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18■□□□□ 0.47
TRIM48Q8IWZ4 TNXA-203ENST00000507684 2038 ntBASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 AC069148.1-201ENST00000608741 768 ntBASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 AC079602.3-201ENST00000623931 403 ntBASIC17.99■□□□□ 0.47
TRIM48Q8IWZ4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms