Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 MIR940-201ENST00000401276 94 ntBASIC19.43■□□□□ 0.7
RNF135Q8IUD6 AL023284.2-201ENST00000405850 579 ntBASIC19.43■□□□□ 0.7
RNF135Q8IUD6 AC005104.2-201ENST00000427818 678 ntBASIC19.43■□□□□ 0.7
RNF135Q8IUD6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 AC005332.3-201ENST00000589904 676 ntBASIC19.43■□□□□ 0.7
RNF135Q8IUD6 AC112497.1-201ENST00000624824 639 ntBASIC19.43■□□□□ 0.7
RNF135Q8IUD6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 MIR3180-5-201ENST00000583743 153 ntBASIC19.42■□□□□ 0.7
RNF135Q8IUD6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 AL355385.1-201ENST00000606123 409 ntBASIC19.42■□□□□ 0.7
RNF135Q8IUD6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
RNF135Q8IUD6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 AL139424.1-201ENST00000607572 797 ntBASIC19.41■□□□□ 0.7
RNF135Q8IUD6 AC022898.2-201ENST00000616822 1312 ntBASIC19.41■□□□□ 0.7
RNF135Q8IUD6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF135Q8IUD6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms