Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 AP000997.3-201ENST00000623333 2250 ntBASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC22.67■■□□□ 1.22
CHD1LQ86WJ1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 ECEL1P2-202ENST00000465689 757 ntBASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 AL024508.2-201ENST00000607749 1894 ntBASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHD1LQ86WJ1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 SEC1P-202ENST00000473944 940 ntBASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 AC010240.3-201ENST00000607688 395 ntBASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD1LQ86WJ1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHD1LQ86WJ1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.22
CHD1LQ86WJ1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC22.64■■□□□ 1.22
CHD1LQ86WJ1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHD1LQ86WJ1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
CHD1LQ86WJ1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHD1LQ86WJ1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHD1LQ86WJ1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHD1LQ86WJ1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
CHD1LQ86WJ1 AC134043.2-201ENST00000624206 2238 ntBASIC22.64■■□□□ 1.21
CHD1LQ86WJ1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
CHD1LQ86WJ1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
CHD1LQ86WJ1 GRAMD4P1-201ENST00000435181 1110 ntBASIC22.64■■□□□ 1.21
CHD1LQ86WJ1 AC009947.2-201ENST00000444014 672 ntBASIC22.64■■□□□ 1.21
CHD1LQ86WJ1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CHD1LQ86WJ1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHD1LQ86WJ1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms