Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 AC063926.3-201ENST00000624734 5658 ntBASIC13.88□□□□□ -0.19
MRPL54Q6P161 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
MRPL54Q6P161 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
MRPL54Q6P161 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MRPL54Q6P161 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC13.88□□□□□ -0.19
MRPL54Q6P161 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC13.88□□□□□ -0.19
MRPL54Q6P161 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MRPL54Q6P161 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC13.88□□□□□ -0.19
MRPL54Q6P161 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
MRPL54Q6P161 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
MRPL54Q6P161 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
MRPL54Q6P161 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.88□□□□□ -0.19
MRPL54Q6P161 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.88□□□□□ -0.19
MRPL54Q6P161 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MRPL54Q6P161 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
MRPL54Q6P161 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MRPL54Q6P161 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MRPL54Q6P161 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MRPL54Q6P161 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
MRPL54Q6P161 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MRPL54Q6P161 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MRPL54Q6P161 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MRPL54Q6P161 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.87□□□□□ -0.19
MRPL54Q6P161 FLJ16779-201ENST00000612722 7638 ntBASIC13.87□□□□□ -0.19
MRPL54Q6P161 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.87□□□□□ -0.19
MRPL54Q6P161 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC13.87□□□□□ -0.19
MRPL54Q6P161 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.87□□□□□ -0.19
MRPL54Q6P161 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.87□□□□□ -0.19
MRPL54Q6P161 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.87□□□□□ -0.19
MRPL54Q6P161 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.87□□□□□ -0.19
MRPL54Q6P161 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC13.87□□□□□ -0.19
MRPL54Q6P161 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.87□□□□□ -0.19
MRPL54Q6P161 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
MRPL54Q6P161 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.87□□□□□ -0.19
MRPL54Q6P161 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
MRPL54Q6P161 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.87□□□□□ -0.19
MRPL54Q6P161 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.87□□□□□ -0.19
MRPL54Q6P161 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
MRPL54Q6P161 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
MRPL54Q6P161 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
MRPL54Q6P161 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.87□□□□□ -0.19
MRPL54Q6P161 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.87□□□□□ -0.19
MRPL54Q6P161 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL54Q6P161 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 AL513477.1-201ENST00000602865 2407 ntBASIC13.86□□□□□ -0.19
MRPL54Q6P161 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.86□□□□□ -0.19
MRPL54Q6P161 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
MRPL54Q6P161 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
MRPL54Q6P161 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
MRPL54Q6P161 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 PCDH8P1-201ENST00000428983 2773 ntBASIC13.86□□□□□ -0.19
MRPL54Q6P161 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
MRPL54Q6P161 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC13.86□□□□□ -0.19
MRPL54Q6P161 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.86□□□□□ -0.19
MRPL54Q6P161 RARRES2P4-201ENST00000514074 484 ntBASIC13.86□□□□□ -0.19
MRPL54Q6P161 AC106739.1-201ENST00000617035 715 ntBASIC13.86□□□□□ -0.19
MRPL54Q6P161 TFG-210ENST00000620299 1289 ntTSL 5 BASIC13.86□□□□□ -0.19
MRPL54Q6P161 AC010536.3-201ENST00000620306 533 ntBASIC13.86□□□□□ -0.19
MRPL54Q6P161 MYC-208ENST00000641036 567 ntBASIC13.86□□□□□ -0.19
MRPL54Q6P161 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
MRPL54Q6P161 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
MRPL54Q6P161 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms