Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.31■□□□□ 0.36
LPCAT4Q643R3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 AL390719.1-204ENST00000412397 1219 ntBASIC17.3■□□□□ 0.36
LPCAT4Q643R3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT4Q643R3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 ZNRF2P3-201ENST00000424200 374 ntBASIC17.29■□□□□ 0.36
LPCAT4Q643R3 CYP2T1P-201ENST00000432607 1285 ntBASIC17.29■□□□□ 0.36
LPCAT4Q643R3 TUBB8P6-201ENST00000436895 1288 ntBASIC17.29■□□□□ 0.36
LPCAT4Q643R3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 AC069236.1-201ENST00000604339 616 ntBASIC17.29■□□□□ 0.36
LPCAT4Q643R3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 AC105020.1-201ENST00000435356 2205 ntBASIC17.29■□□□□ 0.36
LPCAT4Q643R3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LPCAT4Q643R3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 RPS2P52-201ENST00000469610 820 ntBASIC17.28■□□□□ 0.36
LPCAT4Q643R3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 AC005181.1-201ENST00000604782 1256 ntBASIC17.28■□□□□ 0.36
LPCAT4Q643R3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms