Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 HTR7P1-202ENST00000624664 4411 ntBASIC21.92■■□□□ 1.1
RNF20Q5VTR2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 AP000523.1-201ENST00000398242 1049 ntBASIC21.92■■□□□ 1.1
RNF20Q5VTR2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.92■■□□□ 1.1
RNF20Q5VTR2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF20Q5VTR2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
RNF20Q5VTR2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF20Q5VTR2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.91■■□□□ 1.1
RNF20Q5VTR2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.91■■□□□ 1.1
RNF20Q5VTR2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
RNF20Q5VTR2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
RNF20Q5VTR2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF20Q5VTR2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF20Q5VTR2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF20Q5VTR2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.91■■□□□ 1.1
RNF20Q5VTR2 AC010240.3-201ENST00000607688 395 ntBASIC21.91■■□□□ 1.1
RNF20Q5VTR2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
RNF20Q5VTR2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.91■■□□□ 1.1
RNF20Q5VTR2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
RNF20Q5VTR2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF20Q5VTR2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF20Q5VTR2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF20Q5VTR2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.91■■□□□ 1.1
RNF20Q5VTR2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
RNF20Q5VTR2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
RNF20Q5VTR2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF20Q5VTR2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.91■■□□□ 1.1
RNF20Q5VTR2 NOC2LP1-202ENST00000452600 2235 ntBASIC21.91■■□□□ 1.1
RNF20Q5VTR2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
RNF20Q5VTR2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.91■■□□□ 1.1
RNF20Q5VTR2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 ECEL1P3-201ENST00000427961 737 ntBASIC21.9■■□□□ 1.1
RNF20Q5VTR2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.9■■□□□ 1.1
RNF20Q5VTR2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF20Q5VTR2 AC099343.3-201ENST00000605834 2503 ntBASIC21.89■■□□□ 1.1
RNF20Q5VTR2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
RNF20Q5VTR2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF20Q5VTR2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RNF20Q5VTR2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.89■■□□□ 1.1
RNF20Q5VTR2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.89■■□□□ 1.1
RNF20Q5VTR2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
RNF20Q5VTR2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF20Q5VTR2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF20Q5VTR2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF20Q5VTR2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.89■■□□□ 1.1
RNF20Q5VTR2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF20Q5VTR2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF20Q5VTR2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF20Q5VTR2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.89■■□□□ 1.09
RNF20Q5VTR2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF20Q5VTR2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.89■■□□□ 1.09
RNF20Q5VTR2 SEC1P-202ENST00000473944 940 ntBASIC21.89■■□□□ 1.09
RNF20Q5VTR2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.89■■□□□ 1.09
RNF20Q5VTR2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF20Q5VTR2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.89■■□□□ 1.09
RNF20Q5VTR2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms